Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2141 |
Symbol | |
ID | 5104880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2060384 |
End bp | 2060584 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640508032 |
Product | DNA-directed RNA polymerase subunit N |
Protein accession | YP_001192204 |
Protein GI | 146304888 |
COG category | [K] Transcription |
COG ID | [COG1644] DNA-directed RNA polymerase, subunit N (RpoN/RPB10) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000023136 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000569009 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCATCC CTGTCAGATG CTTCACATGC GGTTCCCTTA TAGCTGATAA GTGGGATGCG TTCAGCACTA GGGTTAGGGC TGGAGAAGAC CCAGGAAAGG TTCTTGATGA CTTGAACGTG AAGAGGTTAT GTTGTAGACG TAGCTTGCTT ACACACGTTG ACATTATAAG GGAAGTAGTT AATTACACTA GACCAATTTA G
|
Protein sequence | MIIPVRCFTC GSLIADKWDA FSTRVRAGED PGKVLDDLNV KRLCCRRSLL THVDIIREVV NYTRPI
|
| |