Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2096 |
Symbol | ubiA |
ID | 5104390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2017743 |
End bp | 2018648 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507986 |
Product | prenyltransferase |
Protein accession | YP_001192160 |
Protein GI | 146304844 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.274994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTGGG ATCCTGGAGG AGCGACAGCT AGTCACGGTA AACTCTACAT CTATTTGAAG TTCCTTAGAA TGGAGCAGAC ATTTTTTAGT CTGCCCATGG CATACATGGG GGCGTTCGTA GCCGTTAGGG GTATACCATC TCCAAGCGTT TTGTTACTAA TATTTTCGGC CCTCTTCTTC CTTAGGATAG CAGGGATGAC TAATGATAAC CTAGCTGATA GGGAGATAGA CTCGAGAAAT CCCAGAACAA GGACGAGGCC CCTTGTCACT GGAGCTATAA CCACTAAAGA GGCCAAGGTA TTGATAGCCA TAGGCCTCGT GGGTTTCTTC GCGTCTGCCT ATCTTGTGAA TAGATGGGCC TTCCTTCTTT CACCCATAGT GGCACTGGTT ACAATGACCT ATCCTTACAT GAAGAGGTTC ACTGCCTTCG CGAATTATCA AATAGCCACA GTGCAGGGCC TGGCAGTATT TAGCGGAGCT GTGGCCAGCG TGGGAGTAGA TGCAACATCC CTGACCCAGG TGTTGGGATC CGTTCCTTGG TTGTTCGTGA TTGCAACGAT ACTTTGGGCC GTTGGATTCG ATCTTTACAA TCATATTCCG GATGCAGATT TCGATAGAAA GATGGGTCTA CATAGTTTCG CTGTAGTGCT GGGTAACAGG GCATTAACCT TCGCTGGACT AAATCAGTTG TTCTCAGTGC TCCTCGATAT CCTTGCTGAT TTCATGTATA ACCTAGGACC TATTTCCTAT GCCTCAACGG TGTTGCACGG CCTCGTTATG GCCTACGCCT TCTATTTGGC CTCCAAGGGG ATGTTTGGGA AGGCTTTCTA CTATAATATT TACTCCTCAA TTATACTGGG GTTAGGCATA GACTTGGATA TTCTTCTTGG GATACCATTC ACCTAA
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Protein sequence | MSWDPGGATA SHGKLYIYLK FLRMEQTFFS LPMAYMGAFV AVRGIPSPSV LLLIFSALFF LRIAGMTNDN LADREIDSRN PRTRTRPLVT GAITTKEAKV LIAIGLVGFF ASAYLVNRWA FLLSPIVALV TMTYPYMKRF TAFANYQIAT VQGLAVFSGA VASVGVDATS LTQVLGSVPW LFVIATILWA VGFDLYNHIP DADFDRKMGL HSFAVVLGNR ALTFAGLNQL FSVLLDILAD FMYNLGPISY ASTVLHGLVM AYAFYLASKG MFGKAFYYNI YSSIILGLGI DLDILLGIPF T
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