| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2073 |
|---|
| Symbol | |
|---|
| ID | 5105053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1990376 |
|---|
| End bp | 1991869 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640507963 |
|---|
| Product | ATPase-like protein |
|---|
| Protein accession | YP_001192137 |
|---|
| Protein GI | 146304821 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1106] Predicted ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.672394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.790362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATACTGT TGAGGCTAGC TGAGTTCTAC GCTAATAACT TCAGGAGTTT GGAGTCAGTT
GAATTAAGGG ATGTTGGAGG CTTCAATGTG ATTGTGGGGT TTAACGGTTA CGGCAAAACT
AACCTGCTGA CGGCAATCTA CCTATACATA AAGAACCTGT CAGCGGGTAT TGAGAAGAGG
TCAATAGAAG ATAAGAACCA GGAATATCTG TTAATGTGGA ACAGTTATGA TACGAGCAAA
CCCATTCTTT TAGGAGGCAG GTTACAGTTT AGTGAGAAGG AAGTTGAGAA AGTCGTGGGA
AAGAGTATGC CCATGAACAT CGACCTAGTG AACAAGTTGA GGTACATTAA TGGATACCTT
GAGTGGGACC TGGACCTCAT CAGAATAAAT GGATCTGTCC CATCCAAGGA CGAAATAGAT
CAGGCCAAAA AGCTGTTGGA CTACGCCTCA AGTCAAGTTG AGTATGTTCC CATTTTCGAT
CAGAACTACT TTGATGACGT ACTCAACAGA ATTATTGGAC TGAACAGATC GCCCATCAGC
TTGAGAAAGT ATTGGTATGA CTTTGCGAAC CTGGTGAGTA ATACTATTCC AGAGGTAAAG
GGAATAGAGA TCTGGGATTC AAAGAAGCTA GTTCTAAACG TGTATAATTT GCCAATCTAC
ATTGACTTAG CTGCTAGTGG ATTTCAGAGA ATAATTCTTA TCCTTTTCGT AATATGGTTG
AGCGGAAACA AGATACTCCT GATCGAGGAA CCAGAGGTGA ACATGCATCC CATCATGCAG
TATAAGATGG CGAAGCTCCT GAAGTCATGG ACTGAAAGCG ATGTTCTACA GGTTTTCATG
ACAACACACT CTCCCTTTAT TGTATCCTCC GATGTGGATA GCTTCATAGT TCTGAGAAGG
GGTCAGACCG CGTCTAAGGC TGTCAACTTC CAGCCCACAG AGGATGTAAA ATCGGCCTTC
TCCATTCTTA ACGTAAATAT CAGTGATCTT CTCTTTAACA AGACTATTAT AGTAACGAGT
GAAATGGCCG AGCCAAACGT AATCCTGAAT TGGCTCAGGA AACTGAACGT GAATCCAGAG
TACAACGGAA TTGTTATATA CACGGTGAGG AACGAACTGG AGTTGCAGAC CTGGCTTAAG
TTAAGGAACA TGCTGAAACT TGACATGCTA TTCCTGGGCC TTTGTGACAA AATAGACATA
GAGTTAAAGG ACTCCTGTCT TCCCCTTACC AAGGAGGTAG AGTCATTTTA CAGTAAGAGT
GGAATGTTAG AGGCACTCAA GAGAATAGGC ATTTACCCAG ATGAAAAGGA AATGAGGGAT
CTCTCTCGGG AAGACAACGC CAGATGGTTG ATAAACGTTC TTAAGAGGAG AGGATTGGAT
TACGGTACCA TGAGATCGTC TATAGGTGAC ATAATATCTA GAATAGATTC CATTGAGATC
CCCAAGGAGA TGGAAATCCT CGTGAATAAA ATTAAAACCG CGCAGGTTAT CTAG
|
|---|
| Protein sequence | MILLRLAEFY ANNFRSLESV ELRDVGGFNV IVGFNGYGKT NLLTAIYLYI KNLSAGIEKR
SIEDKNQEYL LMWNSYDTSK PILLGGRLQF SEKEVEKVVG KSMPMNIDLV NKLRYINGYL
EWDLDLIRIN GSVPSKDEID QAKKLLDYAS SQVEYVPIFD QNYFDDVLNR IIGLNRSPIS
LRKYWYDFAN LVSNTIPEVK GIEIWDSKKL VLNVYNLPIY IDLAASGFQR IILILFVIWL
SGNKILLIEE PEVNMHPIMQ YKMAKLLKSW TESDVLQVFM TTHSPFIVSS DVDSFIVLRR
GQTASKAVNF QPTEDVKSAF SILNVNISDL LFNKTIIVTS EMAEPNVILN WLRKLNVNPE
YNGIVIYTVR NELELQTWLK LRNMLKLDML FLGLCDKIDI ELKDSCLPLT KEVESFYSKS
GMLEALKRIG IYPDEKEMRD LSREDNARWL INVLKRRGLD YGTMRSSIGD IISRIDSIEI
PKEMEILVNK IKTAQVI
|
|---|
| |