| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2059 |
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| Symbol | |
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| ID | 5105039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1978589 |
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| End bp | 1979818 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507949 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001192123 |
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| Protein GI | 146304807 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.761901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGG TCTTAGTTTT AGGTGGAAGA TTCGGCGGAC TTACTGCCGC CTATAACGCA
AAGAGACTGT TGGGGAGCAA GGCTGAGGTT AAGCTGATGA ACCAGGACAG GTTCACGTAC
TTTAGGCCTG CTCTCCCACA CGTGGCCATA GGCGTGAGAG ACGTAGAGGA GCTCAGGATA
GATTTGGCCA GCGCCATGCC AGAGAGGGGA ATATCCTTTG CCCAAGGGAA GGTAGAGAAG
ATAGATGCCG AGTCTAGGAT AGTTTACTAC AAGAAACCAG ATGGAGGAAT GGGAGAAGAG
GAATATGATT ACCTAATGGT GGGGATAGGC GCACACCTCG GGACTGAACT CATAAAGGGA
TGGGATCAGT TCGGTTACAG CGTTTGCGAA CCGGAGTTTG CGGTCAAACT TAGGGATAGA
CTGAAGGACT TCAAGGGCGG ACATATTACC ATCGGATCGG GTCCCTTCTA CCAAGGAAAG
AATCCTAAAC CCAAGGTTCC AGAGAACTTT GTACCTCAAG CAGACTCGGC CTGTGAAGGG
CCTGTCTTCG AGATGTCGCT GATGCTACAC GGGTACTTCA CAAGGAAGGG TATGTGGGAT
AAGGTGAAAA TAACGGTCTA CTCTCCCGGC GAATATCTGT CAGATCTTTC TCCCGCATCC
AGGAAGGCCG TTGCTGAGAT CTATAAAGGA TTGGGAATAG AGCTAGTACA CAACTTCAGA
CTAAAGGAAT TGAGAGAGAA GGAAATAGTG GATGAAAAAG GTAACAAGCT TGAATCGGAT
CTGAGCATAT TACTCCCGCC TTACACGGGT AACCCGGCAC TTAAGGCTTC CACAAAGGAC
CTAGTGGACG ATGGAGGATT CATCCCCACT GACCTGAACA TGCAATCCAT CAAGTATGAC
AACATATATG CAGTTGGCGA TTCTAACGCC CTAACTGTGC CTAAGCTGGG GTACTTGGCA
GTTCAGACTG GCAGGATCGC GGCTCAACAT CTGGCGAAGA GATTGGGAGT TAACACGAAG
GTGGAATCCT ACTATCCCAC CATCGTATGC GTAGCCGACA ATCCACTTGA GGGATATGCC
GTCTCAGTGA AGGACGATAC CTGGTATGGA GGTCAGGTCT CGGTAGCTCA ACCTGCTGCA
GTGAATCACT TAAAGAAGGA ACTATTCACC AAGTACTTCA TGTGGACCAA GGGTGATATG
GTCCTAGAGA AATTCTTGGG AAGCTGGTGA
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| Protein sequence | MTKVLVLGGR FGGLTAAYNA KRLLGSKAEV KLMNQDRFTY FRPALPHVAI GVRDVEELRI
DLASAMPERG ISFAQGKVEK IDAESRIVYY KKPDGGMGEE EYDYLMVGIG AHLGTELIKG
WDQFGYSVCE PEFAVKLRDR LKDFKGGHIT IGSGPFYQGK NPKPKVPENF VPQADSACEG
PVFEMSLMLH GYFTRKGMWD KVKITVYSPG EYLSDLSPAS RKAVAEIYKG LGIELVHNFR
LKELREKEIV DEKGNKLESD LSILLPPYTG NPALKASTKD LVDDGGFIPT DLNMQSIKYD
NIYAVGDSNA LTVPKLGYLA VQTGRIAAQH LAKRLGVNTK VESYYPTIVC VADNPLEGYA
VSVKDDTWYG GQVSVAQPAA VNHLKKELFT KYFMWTKGDM VLEKFLGSW
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