Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2011 |
Symbol | |
ID | 5105233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1943379 |
End bp | 1944431 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507899 |
Product | translation factor SUA5 |
Protein accession | YP_001192075 |
Protein GI | 146304759 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTGC TGAAGATAGA TCCACTTAAT CCAGAAATAG AGTTGATAAG GAAGGCCGCT GAAGTTATTA GGTCTGGGGG TCTAGTTGCT TTTCCCACCG AAACAGTGTA CGGCCTAGGT GGTAATGCCC TAGATCCGAA GGCGGCCGAG AAAGTGTTTA AGGCTAAGAG GAGGCCAATG GACAATCCTC TCATAGTTCA TATAGCTGAC CTAAGTCAAC TGGAAGAGGT TAGTGTGGAC GTTCCTCCAG AGGTTTTAGA TTTAGCCCAG CGGGTCTGGC CGGGTCCGCT CACCTTCATT CTCAAAAGGA ACCCAAGGGT ACCTCTAGAA ACTACGGGGG GCCTCGATAC CGTCGCCGTT AGGATGCCAG CACACCCAAT CGCCCTTCAA CTAATCAGAG AGAGCGGTGT GCCCATTGCC GCCCCAAGCG CCAACCTGGC CACAAAACCT AGTCCAACCC TTGCGGAGCA CGTCATCCAG GACCTTGACG GTTCAGTGGA TGTTGTTATT GACGGGGGAG AGACCTTTTT CGGGGTCGAA TCCACTATCA TAAACCTTAC CGTATCCCCT CCTGTTCTCC TAAGACCTGG ACCCTTCACT GTAGAGGAAC TCAACTCTCT TCTAGGTGAG GTCGTCGTTC CAAAGGAGGT TGCAGAGGGT GGGCAATTCA ACGTAGCTTT AGCTCCCGGA ATGAAATACA AGCATTATGC GCCGAGTAAA CCCCTCTACC TAGTGGAGAA AAAGTCAATC TTCAAGGAAG TTGTAAAAAG GCTAAGGCAA AAGAAAAAGG TAGCTGCTCT CTGCTCCCAG GAAACTTGCG CTGACGTGGA TGAGCCCAAG ATAATCCTGG GAACTAGCGA GAACCTGTAC ACTGTTGCAA AGAACCTGTT TAAGTCCTTT AGGCAACTTG ATACCCTAGA CGTGGATCTA GGTGTCATGG AGCCGTTTCC TGAAAGGGGG ATTGGGTTGG CCATCATGAA TAGGGCAAAA AAGGCCTCAG CTCACATGAT AATACATTCC GTGGAGGAGG CTGACAAGCT TGCAGATAGT TAA
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Protein sequence | MIVLKIDPLN PEIELIRKAA EVIRSGGLVA FPTETVYGLG GNALDPKAAE KVFKAKRRPM DNPLIVHIAD LSQLEEVSVD VPPEVLDLAQ RVWPGPLTFI LKRNPRVPLE TTGGLDTVAV RMPAHPIALQ LIRESGVPIA APSANLATKP SPTLAEHVIQ DLDGSVDVVI DGGETFFGVE STIINLTVSP PVLLRPGPFT VEELNSLLGE VVVPKEVAEG GQFNVALAPG MKYKHYAPSK PLYLVEKKSI FKEVVKRLRQ KKKVAALCSQ ETCADVDEPK IILGTSENLY TVAKNLFKSF RQLDTLDVDL GVMEPFPERG IGLAIMNRAK KASAHMIIHS VEEADKLADS
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