Gene Msed_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1951 
Symbol 
ID5103338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1893327 
End bp1893734 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content47% 
IMG OID640507839 
Producthypothetical protein 
Protein accessionYP_001192015 
Protein GI146304699 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.655053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAC AAACAGTTAA CAAAGAAGAG TGGACTAAGA AACTGATGGA AGCCTTGAAA 
GAGGTTTATG ACCCAGAAAT TCCAGTGGAC ATAGTAAACC TGGGTCTGAT TTATGACCTA
AAGATTTCAG ATGAGGGAGA TGTCTACCTG AAGCTTGGTT TAACTGCGCC TGGTTGCCCG
GTGGTTGACG ATCTCGTTTA CACCGTGCAG GAAGTGGTAA AGGAGACCGT TCCGGCCAGG
AATGTGGATG TAGACATAGA CATGGAAACC CAATGGAGCC CCTTGAAGAT GAGCTCTGAG
GGAAGGGAGA AGTTCAAGAA GCTTTACGGT TACGATATAG TGGAAATGTG GATACAGACC
TATGGCCTTC CAGAGGAGCA GAACGCGTCG CAGAATCAGG GATCCTGA
 
Protein sequence
MSTQTVNKEE WTKKLMEALK EVYDPEIPVD IVNLGLIYDL KISDEGDVYL KLGLTAPGCP 
VVDDLVYTVQ EVVKETVPAR NVDVDIDMET QWSPLKMSSE GREKFKKLYG YDIVEMWIQT
YGLPEEQNAS QNQGS