| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1916 |
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| Symbol | |
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| ID | 5103303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1863317 |
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| End bp | 1863895 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507804 |
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| Product | H+-transporting two-sector ATPase, E subunit |
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| Protein accession | YP_001191980 |
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| Protein GI | 146304664 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1390] Archaeal/vacuolar-type H+-ATPase subunit E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000777149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.663872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCTCTG TAGAGGAATT AATGGGACAG GTTATAGATT CGGAGATGGA GGTCATTAGC
AAGGAGTTAA GCAAGGCTCT CGAGGAGGCC CTTAACCTGG TGAAACAGAA GAGGGACAGC
GTAGAAAGGA CCTATACTGC AAAGATGCAA GAAATGGTAA CAAAAGCCAA GGAGGAGATT
GAGGGAGAGA GAGCTAGGCT CGACATAGAA GTTAAGAGGG CAGTACTTGG CGAGAAGAAC
TACTGGTTAA ACAAGGTCTA CGAGGGTACA ATCAAGTCGT TGGGAACGGT TAAGAACTCA
CAAGGTTATA AGCAAGGCCT TGAATCGGTA CTGAAGAGGG AGCTTAGGGA TGGTTCCATT
GTGTACTGCT CCGAGGATGA AGTTGATCAA GTCCAGAAAA TGATCAAGGG ATTAAAGGCG
AAGGCAGAGG TGAGGTCTGA TCCCAAGATA ATGGGTGGAG TCAAGATACA GTACTCGGAC
GTTGGACTAG TGAGGGATTA CTCCCTTAAC CTTATACTAG ATCAAGTTTT TGAGTCACTA
AAACCCAAGA TAGCTGAGAT TCTATTCGGT GAGATGTAA
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| Protein sequence | MVSVEELMGQ VIDSEMEVIS KELSKALEEA LNLVKQKRDS VERTYTAKMQ EMVTKAKEEI
EGERARLDIE VKRAVLGEKN YWLNKVYEGT IKSLGTVKNS QGYKQGLESV LKRELRDGSI
VYCSEDEVDQ VQKMIKGLKA KAEVRSDPKI MGGVKIQYSD VGLVRDYSLN LILDQVFESL
KPKIAEILFG EM
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