Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1912 |
Symbol | |
ID | 5103299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1858137 |
End bp | 1859060 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507800 |
Product | DNA primase large subunit |
Protein accession | YP_001191976 |
Protein GI | 146304660 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.424658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTGCTTG ACTACAACAA GTATCCCTTC ATGGTCTCTG TTGACGAGGT AATCAAGAGA GAGAACGCTG TCGACCTTTA CACCCTACTC ACCACTGATG GAAAGGCTAT CAGGGAGGCA AAGAACAGGA TAAGGGAGAT AGTCACAGGC AAGGAGGTTA AGAGGCTCAA GGAGTACACC TCTCCCCAGC TGGTGTTCTT CGCGGAGCTC CTCATCCTGG GAGTCCTGAA TGACAAGAGA ACCACGGAGA GAGTCCTTAG AAAGGAAAAG GATCTATTCA TGAGGGACCT TGAAAGGGAG GAGGACGCAG ACCTCCTCAC CGTGTTCAAG TGGCTAGGGT TCAACGTTAA AATGAGTAGC CTAAAGTATC ACGAGGTAAC AAGGGGAAAG GTTCAGCCCA AGAGACTAGA CTATTCTCTC CACTTTCTGG AGTACCTCAA GGCGATAAAG GGGAGCAAGG AGTTCCCCCT GACGCAGAGG ATACTCCACA AGGGATACGT CTACATGGAT AGATCAACTC TCCTCAAATT GCTAGGTTTC AATCTCTTGA AAAGGTTAAG GGAAACTGTG AAACCAATCC CCATGGAGGA AGTTCCAGAG ACGCTCGTGG ACATCATAAT GATGAGAGGA GGGAAGACGC CCCCGTGCAT AAGGGCAATC CAGGAGAAGA GGGAAAGATC ACGGGAGGAG GCCCTCGCCC TGGCAGTTTA CATGGCCAAC ACGGGTTCCA GCGTGGACTC AATAGCCCTA GTCCTGGAGA AGAATGGGGA GGAGAATCCC ATGGAACAGG TTAAGAGGAT CTTCAAGGAG AAAATGGTGA TTTACTCCTG TCAGAGAATG AAAGAGTTGG GCATGTGCGT TTCAGACTGC GGGACTAGAT CTCCTCTTCA GTTTTATTAC GGTAGCGCAG ACATCACCAA GTGA
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Protein sequence | MVLDYNKYPF MVSVDEVIKR ENAVDLYTLL TTDGKAIREA KNRIREIVTG KEVKRLKEYT SPQLVFFAEL LILGVLNDKR TTERVLRKEK DLFMRDLERE EDADLLTVFK WLGFNVKMSS LKYHEVTRGK VQPKRLDYSL HFLEYLKAIK GSKEFPLTQR ILHKGYVYMD RSTLLKLLGF NLLKRLRETV KPIPMEEVPE TLVDIIMMRG GKTPPCIRAI QEKRERSREE ALALAVYMAN TGSSVDSIAL VLEKNGEENP MEQVKRIFKE KMVIYSCQRM KELGMCVSDC GTRSPLQFYY GSADITK
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