Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1902 |
Symbol | |
ID | 5103289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1844074 |
End bp | 1847532 |
Gene Length | 3459 bp |
Protein Length | 1152 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507789 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001191966 |
Protein GI | 146304650 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.165011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0801476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGGTA TTTACCTCTT GGTAGCTTCA CTCGTGCTCT CCTCCCTCGT GTTTTTCATC AAGGACAAGA AGTCCTCTAC AACTCTCACG GGAATAGCGA TAGCGCTCAA CGGCTATTTC CTGTTCAGGA GGGGACTATT TGAGAACTTC TTCGTGGCCA AGACCATTGG CTCCTTTGGA TTGACGGTGA CGGATCTGAA CTTCCCCTTC GTGATTACCA TACTTGCGGT AACCCTGCTC ACCATACCCT ACTCCTTGAG GTATATGGAG GAAAGATTCC ACGAACTTGG TTCAGGAAAC TGGGGTCTTT TCTTCGGGCT CTACTCTCTG TTCTCCGTCT CAATGCTCTA CACTGTGTTG TCCACTAACC TCTTAGAAAT TTACATTTTC CTGGAGATAG CCCTCGTGAC GTCCTTCCTC CTCATCATGC TCTACGGATA TGGAGACAGG AGGAGAATAA GCCTGCTTTA CTTCATTTGG ACCCACGTGG GTACGGTGCT TTTGCTCGCG TCGGTGATAG TGATAGGCCT AGAGACCGGT AGCATGGACG TTTACTCCGC GTTGAACGTG TTTCACGATT ACTCTACCGT GGGGTACGCC GTTGCCATCT TCCTCCTTGC GGTTATAGGA ATGATGGTGA AGGGAGCTCA GGCTGGAGTT AACGTGTGGT TACCATATGC CCACGGCGAG GCTCCAACTC CCATTTCCGT GTTACTTAGT CCCAACATGG TGGGACTTGG CGTCTTCGTG GTTATCCTTT ACTTCTACAT GTTCCCCGGG ATGTCGTTCC TTGCCCCAAT CTTCGTGGGT TGGGCCTTAC TCACCATGAT TTACGGTGGA ATTAATGCGT TGGCTCAAAG GGACTTCAAG AGGTTCCTGG CGTACTCAAG CGTCTCGCAA ATGGGTTACA TGATGCTGGG GGCGGGAGTT GCGTTCCTGA TGGGGTTACC CCTGACCTTA GTTTCGCTCC CACTTGGGAT AATTGCCTCA GCGTTGATTT ACGTATCCCA CGGCTTCGGA AAGGCTCTCC TCTTCATGAG CGCTGGGGCT AACATAACTG AGGCCCACGA GAGGGATATA GAGAAGTTGG GAGGACTGTA CCAGACCTCT CCCCTTCATA CTACTCTTTC ATTCCTGGGA CTACTGAACA TACTTGGTCT TCCTCCTACT GTAGGGCTTA TCAGCGAAGT CCTTCTCCTG TTTGCGACTG GAGAACTGGT GCAGAAGGTG GGTATATCCT GGTTCTTGGT AGTCGTGGTG GCGTTGTTCA TTGCAATTGG GCTCTCCTCA GCTTACGCCA CCTATCTCTT TAAGAAGGTC TACGCTGGGA AACCCCAAAA TCCAGTTTCG CTGGACAAGA TAGCGGAGTA TAGCGTACCC ATGCTCATCT TGGCGGGGCT TAGCGTTGTC CTCTTCTTCT TCCCTCAAGT CAGTGTGGAG TCCCTAGTTA ACTTTATCCA GTCCGTGTCA GGACAGGACA TCTACCTACC GCTAATAGTT TTCCTTCCAG CTTTGGGTTC GCTTCTAGCC CTTATCACCA CGTCCAAGTT AAGCAGAGAT GTGAGGGGAT GGATTGTTAA CATCATGTTA GGTATTAGCA TGATCCTAGC CTGGTTAAAC CTTGGGTCCA CCTTGCTGGT TAATAGGACC TTCTTCGTTC CATCACAATT TTACACCATG TTTGGTTACC TTTCCTTTAG CTCCTCACTC CTTCAGTCAA TACTGGCAGT TTTCGTGTCT ACTCTGTCGT TCTTCATTGG TATTTACAGT GTCGGATACA TGAGAGAGGA TAACGTGTTA AGGAGATATT GGGGGTTCTT CGGATTCTTC GTGAGCTCCA TGCTCGCTGT GGTTCTTTCC AATAATATTC TCCTCTTCAT GGCCGGTTGG GAGGGTACTA GTCTTGCGTC CTACGGTCTA ATTAGTTACT GGCTTGATGA CAACGAGAAG AACGTGGTAG GTGATAAGGG TAGGTTTGTG TTCAACATGG AGTTCCTTTC GAAGCCTACA ACCTCTGGAA TCAGGGCAAT GATATTCACG AGGGTAGGCG ATGTGGGCCT CCTACTTGGC CTTGGGTATC TGGTGTATTT AACCTCGACC TCCACGCTCA CTGGATCCAC CATGCTCTTT ACGCAAGTTG GATCCCTGCC AGGTGTTTTC CAGGTACTCG GTGAGATGGC GACCCTCCCC TTCGGGTTGA CTATGCTGAT TCTACTTTTC CTGGGAGGCC TCTCAAAGAG CGCCCAGTTC CCCTTCACTC AATGGTTGGT GACAGCCATG ACAGGTCCAA CGCCTGTTAG TGCCTTAATC CACGCGGCCA CCATGGTCAA TCTAGGGGCG ATGTTCACAT TCCTTACCTA TCCTTACCTT GCGTTCCAAG CTAACAGTCA AGACGTGGGA ACTCTTCTCA CTTTCTTCTC GGTAATGGCA GGGATTTCCC TGTTCACAGC CCTTTACACC AGCCTCAATG CCCTGGTGTC AAACGAGCAG AAAGTAGTTC TAGCCAACTC AACTGCGGAT CAGATATCAC TCATGATTTT CGCGTCCTCC ATGGGAGGTG TGCTAGCCAT CCTGGATGGT AACCTCATTC TCCTGTTCTC TGGGATAGCA ATTGGGTTAA TCCAGATGAT AGCTCATGGT ATCTACAAGG CAAGCCTGTT CATGAACGCT GGTAGCGTGA TCCATTACAC GGAATCGAGA TACATGGGCA CGGTATCAGG ACTATACAGG GAATTAAAGT GGGTCTTTAT TCTTCAGCTA ATAGCTGCCC TCAACCTCGC TAACGTGCCT CCTCTAGTGG GTTTCTGGGC TCACTCCTAT ATCTCAACCC TAACCTCGGC AAGCGCTCCG CTAAACACGT TCTATCTCTT CCTGGAGTTT CTGGGAGCAA TATATATTGT AAGGTACGTG ATGAAAACCT TCCTGTGGAA GGGAGAGACC CACGAAGAGG AGAAGGGACA TGTTTACCCA GAGATGCTTA TATCTCCCAC TATCCTAGTG CTGGCGTCTA TTGGCTTGGG TGCTTCAATC TCCCTCCTAT CAGGGTTTAT GGCATCTCAC TTCTTCGCGG TAGGATTTGG CTTCGATTTT GTAGAGTTGG GACTTTCCCT TGTCGGTATA GTCATCGCGG TCGCGTTGTA TCTTTCACCT AGGGACTTTG CCAGATATGC GGGATTAAGG CCTCTCATTA ACTTCCTCTA CTATGGATGG TACATCTACC CTGCCCTAGA TAGGTTGGGC GTCTCGTTGT ACAGGGGTGC ATTGGCCACA TATAGGGCCC TCGAGTATGG AACAATCGAC ATGGGACTTA ATGTGAAGCT TCCGTCAGTC CTGATATCTG CTGGCAACAA GTACTTCAAG GACATTCAGA CTGGGTTACT CAGGGATTAC GTCGGACTTT ACGTGGGTGG GTTGATCCTC TTGATGGTCA TAGTCCTACT TGTGTTCGGG GTGATCTAA
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Protein sequence | MLGIYLLVAS LVLSSLVFFI KDKKSSTTLT GIAIALNGYF LFRRGLFENF FVAKTIGSFG LTVTDLNFPF VITILAVTLL TIPYSLRYME ERFHELGSGN WGLFFGLYSL FSVSMLYTVL STNLLEIYIF LEIALVTSFL LIMLYGYGDR RRISLLYFIW THVGTVLLLA SVIVIGLETG SMDVYSALNV FHDYSTVGYA VAIFLLAVIG MMVKGAQAGV NVWLPYAHGE APTPISVLLS PNMVGLGVFV VILYFYMFPG MSFLAPIFVG WALLTMIYGG INALAQRDFK RFLAYSSVSQ MGYMMLGAGV AFLMGLPLTL VSLPLGIIAS ALIYVSHGFG KALLFMSAGA NITEAHERDI EKLGGLYQTS PLHTTLSFLG LLNILGLPPT VGLISEVLLL FATGELVQKV GISWFLVVVV ALFIAIGLSS AYATYLFKKV YAGKPQNPVS LDKIAEYSVP MLILAGLSVV LFFFPQVSVE SLVNFIQSVS GQDIYLPLIV FLPALGSLLA LITTSKLSRD VRGWIVNIML GISMILAWLN LGSTLLVNRT FFVPSQFYTM FGYLSFSSSL LQSILAVFVS TLSFFIGIYS VGYMREDNVL RRYWGFFGFF VSSMLAVVLS NNILLFMAGW EGTSLASYGL ISYWLDDNEK NVVGDKGRFV FNMEFLSKPT TSGIRAMIFT RVGDVGLLLG LGYLVYLTST STLTGSTMLF TQVGSLPGVF QVLGEMATLP FGLTMLILLF LGGLSKSAQF PFTQWLVTAM TGPTPVSALI HAATMVNLGA MFTFLTYPYL AFQANSQDVG TLLTFFSVMA GISLFTALYT SLNALVSNEQ KVVLANSTAD QISLMIFASS MGGVLAILDG NLILLFSGIA IGLIQMIAHG IYKASLFMNA GSVIHYTESR YMGTVSGLYR ELKWVFILQL IAALNLANVP PLVGFWAHSY ISTLTSASAP LNTFYLFLEF LGAIYIVRYV MKTFLWKGET HEEEKGHVYP EMLISPTILV LASIGLGASI SLLSGFMASH FFAVGFGFDF VELGLSLVGI VIAVALYLSP RDFARYAGLR PLINFLYYGW YIYPALDRLG VSLYRGALAT YRALEYGTID MGLNVKLPSV LISAGNKYFK DIQTGLLRDY VGLYVGGLIL LMVIVLLVFG VI
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