| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1896 |
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| Symbol | |
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| ID | 5103283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1840062 |
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| End bp | 1840544 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507783 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_001191960 |
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| Protein GI | 146304644 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.759596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.414005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGAGA AACCCATAGA CCTAGTGGTG AAGCTCCTTC AGGAGCGGAA AATACCCCTG
AAGGTTGAGG GCGACACAAG GGGTTCCATT GAGGTAGATA AGTCGAAACT CGTGGAAACT
GCGAAAGTCT TAAAGGAGCT TGGCTTCGAC CACGTCAAGG CAGTGACCGG TATTGATTAC
CCCGATCAAG CCAAGTTCCA GGTGGTTTAC CACGTTTCCT CCTTTGACCT TCAACTTTCC
AAGGTGATCA TTGCGCTCAA GACTTGGACC TCATACAAGG AACCGGTGGT CCCGAGCCTT
CTCTCTGTTT GGGGAAGTGT GTGGACCGGG GAAAGGGAAA CCTACGAAAT GTTGGGGATA
ACCTTCGAGG GAAATCCAGA CATGAGGAGG TTATTCCTAC CTGAGGACTT CGAAGGGGTT
TACCCCCTGA GAAAGAGTTT CAAGGTTAAG ACGGAGGGGT TGTTCGTTGA CAAGTCAAGT
TGA
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| Protein sequence | MSEKPIDLVV KLLQERKIPL KVEGDTRGSI EVDKSKLVET AKVLKELGFD HVKAVTGIDY
PDQAKFQVVY HVSSFDLQLS KVIIALKTWT SYKEPVVPSL LSVWGSVWTG ERETYEMLGI
TFEGNPDMRR LFLPEDFEGV YPLRKSFKVK TEGLFVDKSS
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