| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1752 |
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| Symbol | |
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| ID | 5104752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1687634 |
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| End bp | 1689016 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507647 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191831 |
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| Protein GI | 146304515 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1690] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000573149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0520768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAC CAGCAACTGT GTTCGCAGAT GACGTACTCA TCGAGAAAAT GAAACAGGAC
ATGACGCTGA GACAGGCAAC TAACGTAGCC TGTCTTCCAG GAGTCCAAGA ATCTGTTTAC
GTGCTTCCCG ATGGCCACCA GGGATACGGA TTCCCCATAG GGGGAATTGC TGCCACGTCC
ATAGATGAGG GAGGAGTAGT CAGCCCAGGC GGAATAGGAT ATGATATAAA CTGTGGAGTT
AGGTTGTTAA GGACTAACCT AGATTATTCT GACATTAAAC CGAAACTAGT TGATATTGTG
GAAGAGCTTC ACAGGAGCGT CCCCAGCGGG GTAGGAAGCG AGGGCAGGAT AAAGCTCACC
CCTCAGGAGC TGGACAACCT CCTACAGGAG GGCGTTAAGT GGGCAGTGGA TAAGGGTTAT
GGATGGAGTG AGGATATGAA TAACATTGAA CAAAGGGGTA GTTGGGAACT AGCTGATCCT
AGTAAGGTAA GTCAAGTGGC AAAACAGAGG GGAGCCGCAC AGCTGGGAAC TCTAGGGGCT
GGAAATCACT TCCTTGAAGT ACAGGTCGTG GATAAGATAT ATGACGAGAG GATAGCTAGG
GCCCTCGGAA TAACAAGGGA AGGGCAAGTT ACTGTCATGG TTCACACGGG ATCTAGGGGT
TTAGGTCATC AGATAGCCAG TGATTACCTG CAAATAATGG AAAGAGCCAT GAAGAAATAT
GGAATAGAGG TACCAGATAG GGAACTGGCA GCGATTCCCT TTGAGAGCAG GGAGGGACAG
GACTATTTCA GGGCGATGGT GTCTGGAGCT AACTTTGCCT GGAGTAACAG GCAACTAATT
ACCAACTGGG TGAGGGAGAG CTTCGGCAAG GTGTTCAAGG TAGATCCTGA GAAGTTGGAC
CTTCACATTG TGTATGATGT GGCCCATAAC ATAGCCAAGA TAGAGGAGTA CGACATAGGC
GGGAAAAGGA AGAAGGTCCT GGTTCACAGG AAGGGTGCGA CCAGGGCATT CCCACCAGGA
AGCCCTGAAA TCCCACAGGA ACACAGGGAA ATAGGGCAAG TAGTTCTTAT TCCAGGAAGC
ATGGGAACAG CAAGTTACGT AATGGCTGGA ATACCTGAGG GTAGAAGGAC CTGGTTCACT
GCCCCGCATG GTGCGGGAAG ATGGATGTCG AGGGAGGCTG CAGTGAGAAA CTACCCTGCC
AACTCAGTTG TGGGATCCCT TGAGGAGAGG GGTATAATAG TGAGGGCTGC CACACGTAGG
GTTATAGCTG AGGAGGCACC CGGTGCATAC AAGGACGTAG ATAGGGTTGC GAGGGTAGCT
CACGAGGTTA AGATAGCTAA GCTAGTTATG AGGCTTAGAC CCATAGGGGT GACCAAGGGT
TGA
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| Protein sequence | MKVPATVFAD DVLIEKMKQD MTLRQATNVA CLPGVQESVY VLPDGHQGYG FPIGGIAATS
IDEGGVVSPG GIGYDINCGV RLLRTNLDYS DIKPKLVDIV EELHRSVPSG VGSEGRIKLT
PQELDNLLQE GVKWAVDKGY GWSEDMNNIE QRGSWELADP SKVSQVAKQR GAAQLGTLGA
GNHFLEVQVV DKIYDERIAR ALGITREGQV TVMVHTGSRG LGHQIASDYL QIMERAMKKY
GIEVPDRELA AIPFESREGQ DYFRAMVSGA NFAWSNRQLI TNWVRESFGK VFKVDPEKLD
LHIVYDVAHN IAKIEEYDIG GKRKKVLVHR KGATRAFPPG SPEIPQEHRE IGQVVLIPGS
MGTASYVMAG IPEGRRTWFT APHGAGRWMS REAAVRNYPA NSVVGSLEER GIIVRAATRR
VIAEEAPGAY KDVDRVARVA HEVKIAKLVM RLRPIGVTKG
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