Gene Msed_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1747 
Symbol 
ID5105110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1679993 
End bp1680289 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content45% 
IMG OID640507642 
ProductDNA/RNA-binding protein albA 
Protein accessionYP_001191826 
Protein GI146304510 
COG category[K] Transcription 
COG ID[COG1581] Archaeal DNA-binding protein 
TIGRFAM ID[TIGR00285] DNA-binding protein Alba 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.597618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.398365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAA CATCTCCTAC TCCAAGTAAC GTAGTCCTTG TAGGTAAAAA GCCAGTAATG 
AACTACGTCC TAGCTGCCTT AACTCTGCTG AACCAAGGCG TTCCAGAGAT CATAATAAAG
GCTAGAGGAA GGGCAATAAG CAAAGCTGTG GACACTGTGG AAATAGTCAG GAACAGATTC
CTTCCAGACA AGATCGAGAT CAGAGCCATA GGCGTAGGCA GCCAAGTGGT AACAAGCCAG
GACGGTAGGC AATCTAGGGT ATCTACTATC GAGATAAGCA TAAAGAAAAA GGCATAA
 
Protein sequence
MSGTSPTPSN VVLVGKKPVM NYVLAALTLL NQGVPEIIIK ARGRAISKAV DTVEIVRNRF 
LPDKIEIRAI GVGSQVVTSQ DGRQSRVSTI EISIKKKA