| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1743 |
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| Symbol | |
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| ID | 5105106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1677092 |
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| End bp | 1678687 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507638 |
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| Product | DNA repair helicase RAD25 |
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| Protein accession | YP_001191822 |
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| Protein GI | 146304506 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.763617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCCT ACAGCAATGA GATACTGGAG AGGCTGATTT CGTTTTCCAG ATTTCTAGGT
GAGGATGAGG AAGGCGGGAA GTTTGAAATC GACCCAGAGA GAGCCAGGTT GAACGGTGTG
ACTCTGGAAC AGATAAAGAA GGTTCTAGGG GAGCTTGGGG TTAAGCTTGA CCCTGAAACC
CTCAATTTCC TGGAGACCGA AATGGGAGGT TATGACGCAG TTTTCGAGCT AAAGGGTAGC
AAGTTGTTGC TCAGGGCCAG GACTAGGATA TCGGAGATCT TGAGAAAATA CAGGATAAGT
ATTCCCTATG ATCCTGCGGA GAGGATTTAC AGGACTAAGC CATTCTACTA TCACTTGCTC
AGGAGAATCC TAGAGAATGA GGGATTAAGG GTTAAGAGAC TGGACTTAAG CAGGGAACGC
TTTTCCCTGA GCTTGTCGGT CAATTTGAGA GAGTATCAGC TTGAGGCAGT TAGAGCCTGG
AAAGATAACG GCTACAGGGG CGTTATTGCC CTTCCCACGG GCGCTGGAAA AACTCTCATA
GGTGTGCAGG GGATCACTAC ACTGGGCCTG CCTACCCTAA TTGTGACGTT TACTAATGAG
CAGTTAAGGC AGTGGGAGGA GACCATAAAG AGATTCACAA AGGGAGATGT AGAGGTTGGC
CTATACTATA GCCGAAAGAA ACATCTAGCC CCCATCACAA TCACTACATA TCAGACCGCA
ATTAAGCATA TGGATGAACT CTCATCCTTT CTATTTCTAA TAATAGATGA AGCTCACCAT
CTTCCAGCGG AAAAGTTCAG GGAGATAGCC TTATCCTGCG TCGCCCCCTA CAGAATGGCC
CTCTCGGCAA CGCCTTATAG GTCAGATGGT AAGCATGTGG AACTGTTTAG GTTGATGGGG
GGCCTAGTGT ATCAGAGAGG AGTTGAGGAA CTTGTTGCGC AGGGTTACCT TGCTCAGTTT
AGGGTTCTGA GGATCAAGAT ACCCCTTACC CTTGAGGAGA AGGCGGAATA TGATAACCTA
ACAAGAAAGT TCAGGTCACT GTCTGAGGGA AGGCCAGTCC TAGAGATAGT GAAGAGGGCA
AAGGAGGGAG ACGTAAAGGC CATGGAGGCT CTAAAAGTAT ACAGCAGGAT AAGGTACCTA
ATAGGTCTAA CGAAGGGGAA GTTGTCCAAG ATTAGGGAGA TCGTTGAGAA AGAAAAGGGT
AGAAAGGTTG TAATATTTAC CCAGTACGTG GAACATGCAG AGCTTATATC GAAGTTAATT
GGGGGGTACA TACTCACCGG TCAGATGCCC AAAAGGGAAA GAGAGCTAGT TTTAGAGAAG
TTCAAGCAGA GCAACTCCGG CGTTCTGGTT TTGACAACCG TGGGTGATGA AGGGTTAGAT
ATTCCCGATG CAAGTGTGGG AATTGTGGTA GCTGGGACTT CCTCCAAGAG GCAGTACATA
CAGAGGCTGG GTAGACTTCT CAGGAATAAT TCTGGGAATA AGGTAGCAAC GTTATACGAA
CTCATTGCTA AGGGAACATC AGAGGAATAT CAATCCAAGA AGAGGAGGTC TACGTCCTTG
GAGGACCTAT TTTACTCACT GGAGGACAAG AAATAG
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| Protein sequence | MKPYSNEILE RLISFSRFLG EDEEGGKFEI DPERARLNGV TLEQIKKVLG ELGVKLDPET
LNFLETEMGG YDAVFELKGS KLLLRARTRI SEILRKYRIS IPYDPAERIY RTKPFYYHLL
RRILENEGLR VKRLDLSRER FSLSLSVNLR EYQLEAVRAW KDNGYRGVIA LPTGAGKTLI
GVQGITTLGL PTLIVTFTNE QLRQWEETIK RFTKGDVEVG LYYSRKKHLA PITITTYQTA
IKHMDELSSF LFLIIDEAHH LPAEKFREIA LSCVAPYRMA LSATPYRSDG KHVELFRLMG
GLVYQRGVEE LVAQGYLAQF RVLRIKIPLT LEEKAEYDNL TRKFRSLSEG RPVLEIVKRA
KEGDVKAMEA LKVYSRIRYL IGLTKGKLSK IREIVEKEKG RKVVIFTQYV EHAELISKLI
GGYILTGQMP KRERELVLEK FKQSNSGVLV LTTVGDEGLD IPDASVGIVV AGTSSKRQYI
QRLGRLLRNN SGNKVATLYE LIAKGTSEEY QSKKRRSTSL EDLFYSLEDK K
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