| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1719 |
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| Symbol | |
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| ID | 5105082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1657679 |
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| End bp | 1659571 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507614 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_001191798 |
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| Protein GI | 146304482 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAT ACGAAAAAAT GGGACTCAAG GTAGGACTGG AGATTCACCA ACAAATCAAT
ACATCACATA AGCTCTTCTG CGAATGCCCC ACGACAATGG ACGAGGAGAG TCAAGGGGAG
CTGGAGAGAT ATCTAAGGCC TGTGGCCAGC GAACTGGGAC AAATAGATGT TGCAGCGTTC
TTTGAGTGGG AGAAAGGCAA AAAGGTGGTC TATGAAGTTC CTAGGAGGTC TAGCTGTCTT
GTGGAGTGTG ATGAAGAACC ACCCCATCCC ATGAACATAG ACGCAATTAA GCTAGGTCTT
GCCATGACCC TTGCGTTTAA TGGAGAACCC TTGGATGAAA TCTTCGTAAT GAGAAAAACA
GTCATAGATG GTTCTAACAC CTCAGGTTTT CAGCGTACGG CGATAGTCGG GCTTGGGGGA
TACATTAAGG ATGTGGATGG CGTGATAACT ATCCAGACCA TTGCCATAGA AGAAGACGCT
GCGAGAAAGC TAGAGGAAAC CCCTACCTCT GTTAAATATA ACCTGGATAG ACTGGGTATC
CCGCTCATAG AGATCTCCAC AGGTCCTGAT ATTAGGAGCC CCGAGCAGGC AAAGAGAGTT
GCCCTACTCA TTGGCCAGAT GCTCAGGCTC ACAGGAAAAG TGAAGAGAGG TCTAGGAACC
ATAAGGCAAG ATCTCAACGT TTCCATTTTG GGTGGAGTCA AAACGGAGAT CAAGGGGGTA
CAAGACCTGG ACATGATACC AAAGATCATT GAGAATGAAG CCAACAGGCA GAGGGAGTTA
CTCAGGATCA GGGACGAACT GAGAGCTAGG ATTACTAGGG AGGATTTTGC CAAAAAAGTT
GTGGAGAAAG ACCTAACAGA GCTCTTCGCC TCGTCCAGGA GTAGGCTTAT TCAATCTGAA
CTTAAGAAGG GAGGTAAGGT TCTGGGATTA CTGGCACCTG GATTTAAGGG GCTTCTAGGA
AGACAGGTGA TGCCTGGGAG AAGATTTGGG ACAGAGATAT CAGACTACGT TAAGGCCTTG
GCTGGGCTAG GTGGGATATT TCACTCCGAT GAGCTCCCCA ACTATGGTAT AGTGGAGGAA
GAGGTTCAAA GGGTGGCCAA GGAACTGGGA GTAGGTGAAC TAGACGCTTT CATTCTGGTG
GTTGGTCCAG AAGAGAAGGT GAAGAAAGCA ATACAGGTGA TTAAGGACAG GCTATCTCAG
GCGTTTGAAG GCGTACCCAA GGAGACTAGA GCAGCCAATG AGGACGGTAC TAGCAAATTC
ATGAGACCGC AACCTGGTTC AGCTAGAATG TACCCAGAAA CTGACATTCC ATCCATTCTT
TCCAGGGAGT TGCTTGAAGA CGCTAAAAAA ATGGTGCCAC CAACTCCAGA GCAGAAACTT
AAGGAGCTAA TGAAAATGGG TCTAAACGAG GAACTGGCCA AACAGGTATT GAACAGCCCG
AGGTTAGATC AATTTGAGTA TTTGACGAGA AAGTACGTCA ATGTTTCCCC GACCGTCATA
GCGACAACCC TAGAGAACAC GTTAAAGTAC GTTAAGTCTC AAGGTGGAAA CATAGACAAG
ATATCCGATG GAGATATTGA AGCCGTGATT GCGAGCGTGA GCCAAGGAAG GATAACCAAG
GACTCCATTC CGCAGATACT CCTTGAGTAC TCCACACCTA ACTCCAACGT TGGGATAGAG
AGCGTCATTT CCAGGTATAC CGGAATTTCC GAGGAGGAAT TGATCAATCT GATCAAGGAG
ATAGTGGCCC AGAATAGCGA GGAGGTGAAA TCCAAGGGAG AAAAGGCGTT TAGCCTCCTC
ATGGGCAAAG TAATGGAGAG GGTGAGGGGT AGGGCTGAGG GGAAGAAAGT AGCAGAACTA
ATAAGGAAAG TAATGAAAGA TGAGACTGGA TGA
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| Protein sequence | MSEYEKMGLK VGLEIHQQIN TSHKLFCECP TTMDEESQGE LERYLRPVAS ELGQIDVAAF
FEWEKGKKVV YEVPRRSSCL VECDEEPPHP MNIDAIKLGL AMTLAFNGEP LDEIFVMRKT
VIDGSNTSGF QRTAIVGLGG YIKDVDGVIT IQTIAIEEDA ARKLEETPTS VKYNLDRLGI
PLIEISTGPD IRSPEQAKRV ALLIGQMLRL TGKVKRGLGT IRQDLNVSIL GGVKTEIKGV
QDLDMIPKII ENEANRQREL LRIRDELRAR ITREDFAKKV VEKDLTELFA SSRSRLIQSE
LKKGGKVLGL LAPGFKGLLG RQVMPGRRFG TEISDYVKAL AGLGGIFHSD ELPNYGIVEE
EVQRVAKELG VGELDAFILV VGPEEKVKKA IQVIKDRLSQ AFEGVPKETR AANEDGTSKF
MRPQPGSARM YPETDIPSIL SRELLEDAKK MVPPTPEQKL KELMKMGLNE ELAKQVLNSP
RLDQFEYLTR KYVNVSPTVI ATTLENTLKY VKSQGGNIDK ISDGDIEAVI ASVSQGRITK
DSIPQILLEY STPNSNVGIE SVISRYTGIS EEELINLIKE IVAQNSEEVK SKGEKAFSLL
MGKVMERVRG RAEGKKVAEL IRKVMKDETG
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