| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1670 |
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| Symbol | |
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| ID | 5105316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1611723 |
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| End bp | 1612442 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640507564 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191749 |
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| Protein GI | 146304433 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000279655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.985366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATAT CGTATGATAA TTTAATGAAA TTTATAGGTC AAAAGGTGAA GGATGTCTAT
GGAAGAGAAG TTGGGTACAT AGTCCACGTG TACACCGAGG TTGATGGAAC TGTCACTGGG
ATAGAGGTGG CTTATGGAAA TACCTTCTCC ACGTTGGACC CTTCTAGAAT ATCCTTAGTT
AATGATGTAC TGGCCATCTT ACCTGACTGG AAGGCCGACT CTATGAAATC CATCATGCAA
ATGGAAAAAA TAAGGAAGAG GCAAAGGGCC CTAGAAGAAT TATACGCTAA GCAAGAAATT
CCAAAATCTT CCTATGATGA TATGAAAAGA AAACTTGATT CTGAAATGGT GAAAATTAGG
GAGGATTACG CCAAAATTAA GAGCAAGCTG AAGAGCAGAC TAAACGAAGT AGAGGACCAG
ATCACGCATA TAGATAGGGC AATGATTGCC GTTAAGATGA GCTACATAGC TGCTGAGCTG
ACTGAAAGTG CCTATAAAGG CTCCATTGAG ATACTGAGGC AGGCTAAGGA GAGTTATATC
ATAGAGAAGG ACGATATAAG AAAGACCATG GAGAAACTAG ACTTAAGTGA TAGGGATACT
GGATTAGATA TAAAAGGAGC AGGGTCCCTA ACTAATGGAG CAGAGTCGTC AGCAAAACCC
GATCTTAGCA GGACGGAATT ACCAACACCA ATACCTGTTA AAGTCTTAAG CACACAGTGA
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| Protein sequence | MAISYDNLMK FIGQKVKDVY GREVGYIVHV YTEVDGTVTG IEVAYGNTFS TLDPSRISLV
NDVLAILPDW KADSMKSIMQ MEKIRKRQRA LEELYAKQEI PKSSYDDMKR KLDSEMVKIR
EDYAKIKSKL KSRLNEVEDQ ITHIDRAMIA VKMSYIAAEL TESAYKGSIE ILRQAKESYI
IEKDDIRKTM EKLDLSDRDT GLDIKGAGSL TNGAESSAKP DLSRTELPTP IPVKVLSTQ
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