| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1665 |
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| Symbol | |
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| ID | 5104870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1607505 |
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| End bp | 1608995 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507559 |
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| Product | glycine dehydrogenase subunit 2 |
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| Protein accession | YP_001191744 |
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| Protein GI | 146304428 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00835735 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAGGC AGGCGTATTG GGATGAACCT CTAATCACGG AGTATAAGGG GAAGGGAAGA
CAAGGCTTCC TCGTACCTAA GGAAGACCTA GACGTGGAAA TTAAGTTACC TGAAAAGATC
AAGAGGGGAA AGGAGCCTGA ACTTCCCGAG GTTTCGGAGC TTGAGGTCGT TAGGCACTTC
GTGAGACTAT CCCAGATGAG CTTTGGCGTT GACACTGGAA TGATGCCTTT GGGATCATGC
ACCATGAAGT ACAATCCAAA GATAGAGGAA GAGACAGGGG TTGCAGATAG GACTCACCCA
TTACAGGATC AGGACACTGT TCAGGGGAAC CTAGAGGTAA TGTACGAAAT GCAAAGGTGG
CTTGCTGAGG CAACGGGAAT GGACGAATGT AGCTTACAGG TTCCGGCGGG ATCAGCTGGC
GAACTGGCTG GCGTGCTCAT GATCAGGAAA TACCACAGGG ATCAGAATAG GAGGAGGGAG
GAGATGCTTG TTGCTGACTC AGCCCACGGA ACAAATCCGG CAAGCGCAGC AATGGCTGGC
TTCTCAGTGA TCTACATCAA GTCTAACCAG GAGGGCTTGG TTGACCTCAA CGTGCTCAAA
GGGACAATAT CAGATAACGT TGCAGGGTTC ATGTTAACTA ATCCTAATAC CTTGGGACTC
TTTGAGGAAA ACATCAAGGA GATAGCTGAG CTGGTTCACT CGGTAGACGG AGTCCTCTAC
TATGATGGCG CTAACCTAAA CGGAATCCTG GGAATAGTGA GACCAGGGGA CATGGGATTT
GATATAGTTC ATCTCAATCT TCACAAGACC TTCGGAGTCC CCCATGGGGG TGGAGGTCCA
GGGGCTGGAG CCGTGTGTGC CAAGGGTAAG ATGACTAAGT ATCTCCCGTA CCCCATAGTG
TCCAAGGGAG AGAGGTACTA TCTTGTTAAG CCTGAGAGGT CCATAGGGAA GATCTCGGTG
TTTAACGGAA ACTTTGGTAA CCTGATGAGG TCCTATGCCT ACATTCTTGG CCTTGGCGGA
AAGGGAGTGT CCATGATTGG AAGAATGAGT ACATTGGCCA CAAACTACCT GATAGCGAAA
CTTAGAGGAG TGAGGGGACT GGAGTTGATG GCTCCTCACC GGTTCAGAAA ACATGAGGTA
GTATTCAGCG CAAAGAAACT GGCAGAGGAA ACTGGGGTGA CTGCGTTTGA TATAGCCAAG
GCTTTACTCG ACAGGGGCTT CTATGCGCCC ACCATATACT TCCCGCCCAA TGTGGAGGAG
GCTCTGATGA TCGAGCCCAC AGAAACTGAG CCCATAGAAG TCCTGGATCA GTACGCCAAC
GCAATCAAGG ATATTGTGGA GAAAGCATAT TCCAACCCTT CCTCCATTAC TTCGGCTCCC
CAAAACACGT CAGTGGGTAG ACTTGATCAG GTTAAGGCAA ATCATCCGAG CACTATGACC
CCAACCTATA GGGTTCTCAA GTCTAGGTTA GCGAGCCAAG GAAGAAAGTA G
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| Protein sequence | MWRQAYWDEP LITEYKGKGR QGFLVPKEDL DVEIKLPEKI KRGKEPELPE VSELEVVRHF
VRLSQMSFGV DTGMMPLGSC TMKYNPKIEE ETGVADRTHP LQDQDTVQGN LEVMYEMQRW
LAEATGMDEC SLQVPAGSAG ELAGVLMIRK YHRDQNRRRE EMLVADSAHG TNPASAAMAG
FSVIYIKSNQ EGLVDLNVLK GTISDNVAGF MLTNPNTLGL FEENIKEIAE LVHSVDGVLY
YDGANLNGIL GIVRPGDMGF DIVHLNLHKT FGVPHGGGGP GAGAVCAKGK MTKYLPYPIV
SKGERYYLVK PERSIGKISV FNGNFGNLMR SYAYILGLGG KGVSMIGRMS TLATNYLIAK
LRGVRGLELM APHRFRKHEV VFSAKKLAEE TGVTAFDIAK ALLDRGFYAP TIYFPPNVEE
ALMIEPTETE PIEVLDQYAN AIKDIVEKAY SNPSSITSAP QNTSVGRLDQ VKANHPSTMT
PTYRVLKSRL ASQGRK
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