| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1623 |
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| Symbol | |
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| ID | 5103987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1569587 |
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| End bp | 1570753 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507513 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_001191702 |
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| Protein GI | 146304386 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000252713 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTAC ACATAGCTAC ATCACAGGAA ATAAGGGAGG GAAAGATAAC TGACATATAT
TTCGAAAGAA CCTCAAGGGC GTTGGAGAAG GCTGGAATAA CCGACGTGAA GGTTAGGATG
GAGTTTCACT CTTACGGATT GCCGAAGGGC TACGAATGGG GAGTTTTTGC GGGTTTAGAG
GAGGCACTGT ACCTCTTGGA AGGTAGGAAT GTAGATGTTT ATGCAATGGA TGAGGGAACA
TTGTTCAGGG AAATCGAGCC CGTCCTGGTA ATAGAGGGGA ACTATCTGGA GTTTGGGATC
TTGGAGACAG CACTTCTTGG CGTTTTAAGG CATGCCAGCA GTATTGCAAC CAAGGCTGCT
AGAATAAAGA GCCTTGCCAT GGACAAGCAG GTCATATTTT TCGGTCTCAG ATCAGTTCAT
CCAGCTATAG CGCCCATGGT TGATAGGTCG GCCTATATAG GCGGAATGGA TGGAGTTTCA
GGCGCATTTA GCGAAAGGGA ATTGGGAGTT AAGCCCTCCG GTACCATGCC CCATGCATTA
ATGCTCGCTG TGGGGGATAA TGTAGAGGCT TGGAAGATAT TTGATGCAGG CGTTGAATCT
GACGTTCCGA GGATAATCCT AGTGGACACC TTTGAGGATG AAAGAACCGA GGCTCTCAAG
GCAGCTCGAC TTCTGGGCAA AAAGCTATAC GGAATTAGAC TCGATACTCC CTCAAGTAGG
AGGGGGAACT TTAAGAAAAT TATTCAGGAA GTTAGATGGA CCCTTAATCT TCACGGGTTT
ACTGATGTAA AGATTATAGT GAGTGGAGGC TTAGATGAGG CTCAAGTAGT TGAGTTGCGG
GACTACGTAG ACGGCTTTGG GGTTGGGACA AGCGTTGCCT TCCCGGAGAG CGTGGACTTC
AGTGCGGACA TCGTTGAGAA ATTTGTGGAC GGAAAATGGA TCCCCATCAC AAAGAGGGGT
AAGTGGCCTG GATTCAAGCA AGTGTATCGA TGTGGAACGG AGGATCATAT AGTTCCTTGG
GGGAAGGAAA TGGAATGCGA GCCTCTTCTC AAAAAGTATA TGGAGAAAGG AAAACTAACT
AGAAGCTTAC CAACTCCTTC AGAGATAAGA GAAAGGGTCC TATCCCAGCT CAAGAAAATT
TCAGTGCCCG CGCAACAGGA GAGATAG
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| Protein sequence | MKLHIATSQE IREGKITDIY FERTSRALEK AGITDVKVRM EFHSYGLPKG YEWGVFAGLE
EALYLLEGRN VDVYAMDEGT LFREIEPVLV IEGNYLEFGI LETALLGVLR HASSIATKAA
RIKSLAMDKQ VIFFGLRSVH PAIAPMVDRS AYIGGMDGVS GAFSERELGV KPSGTMPHAL
MLAVGDNVEA WKIFDAGVES DVPRIILVDT FEDERTEALK AARLLGKKLY GIRLDTPSSR
RGNFKKIIQE VRWTLNLHGF TDVKIIVSGG LDEAQVVELR DYVDGFGVGT SVAFPESVDF
SADIVEKFVD GKWIPITKRG KWPGFKQVYR CGTEDHIVPW GKEMECEPLL KKYMEKGKLT
RSLPTPSEIR ERVLSQLKKI SVPAQQER
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