| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1585 |
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| Symbol | thrS |
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| ID | 5104030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1532863 |
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| End bp | 1534488 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507471 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001191664 |
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| Protein GI | 146304348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000347084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0207238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCCT ATAGAGGATT GTGGCTAAAG GGAGCAATAG TAATGGCATT AAACATGTAT
GAGGCTGGGC TCACTCCAGT GGAGATAGGC CTAGGAGAGA GAGATTTTTA CATTGATGTT
CAGTCAGATT CGGCTCTTTC CCTTCAGGAG TCTGAGAAGT TTGCCCAGTG GAAAGATCAC
AAGTACGAGA TCAAGGACGG AAAGGTAACC TATAACGGAA AACAAATACT TCTTCAAGGG
GACGTGACAC CCTCTGGAGA ACCAAGATAT TTCAAGGTTC TGAACATCTC AGTACATCAT
CCCTCAGCTA ACGTTCAGTT GGTGAGGATT AGGGGTATTG CCTTTGAGAC CAAGGAACAA
ATGGACGATT ACCTTCAGTG GTTGGAGAAG GCCTCCGAGA CTGATCATCG TATTATAGGG
GAGAGGATGG ATCTCTTCAG TTTCCACGAG GAATCTGGTC CAGGTCTAGT CCTGTTCCAT
CCCAAGGGCC AGCTAATTAG AAATGAGATG ATAAACTACA TGAGGGAGAT TAACGCTTCC
ATGGGATATC AAGAGGTCTA CACATCTCAC GTGTTTAGGA CTGTTCTTTG GAAGATAAGC
GGTCATTACG ATACTTACAG GGACAAGATG TTGATCTTCC AAAAGGATGA TGACGAACTA
GGAATAAAAC CCATGAATTG TCCCGCTCAC ATATTAATCT ACAAGTCAAG AGTTAGGAGT
TACAGAGATC TTCCCATAAG GTTCTCCGAA TTCGGCAACG TTTATAGATG GGAGAAGAAG
GGGGAGCTTT ACGGCTTACT TAGAACAAGG GGATTCACGC AGGATGACGG TCATATCTTT
TTAAGGGAGG ATCAGCTGAA GGACGAGGTA AAGAATCTAG TTAGGAAGAC TCTTGACGTC
CTCGGTAAGT TCGGGTTTAA GGGAGAGGAC GTTCGGATAA ATCTGAGCAC AAGACCAGAT
GAAAGTATAG GAAGCGATGA ACAGTGGGAG AAGGCGACTA AGGCATTGCT AGATGTACTA
AAGGAACTTA ACGTTCCCTA TGTCGTGAAG GAGAAGGAGG GGGCGTTTTA TGGACCCAAA
ATAGATTTTG ACATAAGGGA CAGCTTAAAC AGATGGTGGC AATTGTCCAC TATTCAGGTA
GATTTCAATC TGCCTGAAAG ATTCAAACTG GAGTACGTGG ATGAGGATGG AAGCAAGAAG
AGGCCGGTCA TGGTTCACAG GGCCATATAC GGCTCGCTCG ACAGAATGAT AGCCATACTT
CTTGAACATT TCCGTGGAAA GTTACCCACC TGGTTGTCTC CCGTTCAGGT AAGGGTTCTA
CCCATAAGTG AGGACAACCT AGATTACGCT AAGAGGGTTA TGGACGTGCT AGTGCAGAGA
GGTATCAGAA CGGAAATCGA TCCGAGCGGG GAAACGCTTT CCAAGAGGAT AAAGAGAGGT
TATGATGACG GTGTTCCTTA CCTTGTCATT GTTGGTAGGA AAGAGGCCTC TGAGGAAAAG
GTAACCATCA GGGCCAGAGG AAACGTGGAG ATAAAGGGGG TTCCTCTTTC CAGATTTGTG
GATGAGCTCT CCCTAGAAAT CGGGAACAGG GACGCTGAAA ATACTCTGAT TAAGAGGATT
GGATAA
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| Protein sequence | MESYRGLWLK GAIVMALNMY EAGLTPVEIG LGERDFYIDV QSDSALSLQE SEKFAQWKDH
KYEIKDGKVT YNGKQILLQG DVTPSGEPRY FKVLNISVHH PSANVQLVRI RGIAFETKEQ
MDDYLQWLEK ASETDHRIIG ERMDLFSFHE ESGPGLVLFH PKGQLIRNEM INYMREINAS
MGYQEVYTSH VFRTVLWKIS GHYDTYRDKM LIFQKDDDEL GIKPMNCPAH ILIYKSRVRS
YRDLPIRFSE FGNVYRWEKK GELYGLLRTR GFTQDDGHIF LREDQLKDEV KNLVRKTLDV
LGKFGFKGED VRINLSTRPD ESIGSDEQWE KATKALLDVL KELNVPYVVK EKEGAFYGPK
IDFDIRDSLN RWWQLSTIQV DFNLPERFKL EYVDEDGSKK RPVMVHRAIY GSLDRMIAIL
LEHFRGKLPT WLSPVQVRVL PISEDNLDYA KRVMDVLVQR GIRTEIDPSG ETLSKRIKRG
YDDGVPYLVI VGRKEASEEK VTIRARGNVE IKGVPLSRFV DELSLEIGNR DAENTLIKRI
G
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