| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1577 |
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| Symbol | |
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| ID | 5104022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1526471 |
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| End bp | 1527694 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507463 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001191656 |
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| Protein GI | 146304340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1078] HD superfamily phosphohydrolases |
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| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00516026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATTAA TAAGAGATCC AGTTCATGGT TACATAGAGG TACCAGATAG GCTACTTCCC
ATCGTATCAA ATCCCCTTTT TCAGCGTCTA AGATACGTGA AGCAGACTGC CTTAGCTTAC
ATGGTGTACC CCGGGATGAA CCATACGCGT TTTGAGCATA GCCTCGGGGT CATGCACCTT
TCCCTTGAGT TCCTAAAGTA CATCCGGGAA AATTCCTCCC TCGAGTTAGA CCAAGAGGTC
ATGGAACTGA TAGCTGTAAC TGCGATGCTC CATGACGTGG GTCACCTTCC CTTCTCCCAC
ACCTTCGAGA ACGCCCTTCA GGTCGCGAGG CAGGTTTATG GCGTAGATGT GTTTGAGAAA
GATAAGAAAA CCCACGTAAT TCTAGGCACT CAACTGATTG AGAAGGGTCT CGCATCTGAC
CTGGAGAAGA ATTTCAAGAC ATTTGAGGAC CCCGTCAAGT TCGTCACTAG AGTGCTGATG
GAGACACCGC GTAACAGGGA AGAGAAATTA GCTCATCTAA TAATTTCCAA TTTCATCGAC
GCAGATAGGA GCGATTACCT TCTCAGGGAT TCATATTATG CAGGCGTGGA ATATGGGCAG
TTCGACATCG AGAGAATGAA GAGATTTCTA TATTTCGAGA ATGACATGTT GGTTGTTCTA
GGCAAAGTCT TGCCCATAGT GGAGCAATTT CTCCTTGCAA GGATGTACAT GTTTCAGAAC
GTGTATTTCC ACAGTGTTGT TGGAATGTAT AACGCTATTC TTTCACAGGC TATAGCCCAG
TTACTTAGGG ATGGGATCAT AGAGATGCCA GTGGAAGTGG AGGATTTTTT AGTATTCGAT
GATAATTTTG TGATTTCCAA GCTACAACAT GTCAGGCGTG AGTTACGCGA TGCCATAATG
TATAGGCAAG GTTTCAGGAG AATCAAGATA GAACCCAGTC CTAACTGCAT TGAGAAATTG
GAGTCGATAA AACAGGAGAT ACGTGAGGAT ATGAGATCGT CGGGTGGTCT CCTCATTTAT
CACGAATTCA ACGATGTTCC ATATAGGGAG GAGAAGGATG AGGCTGTTTA TATACTCACC
CCTCATGGAG TGGAAAGGTT GAAAAGGGTA TCTCCCTTGA TTGGTTCACT GAGCGAAATA
AGGAAAGTGG TAGTGGGATA TCACGTGAGC AGAGACGATC TGGGAAGAAA ATATGAGAAG
ATATTGAGCG AATGTAAGGA CTAG
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| Protein sequence | MKLIRDPVHG YIEVPDRLLP IVSNPLFQRL RYVKQTALAY MVYPGMNHTR FEHSLGVMHL
SLEFLKYIRE NSSLELDQEV MELIAVTAML HDVGHLPFSH TFENALQVAR QVYGVDVFEK
DKKTHVILGT QLIEKGLASD LEKNFKTFED PVKFVTRVLM ETPRNREEKL AHLIISNFID
ADRSDYLLRD SYYAGVEYGQ FDIERMKRFL YFENDMLVVL GKVLPIVEQF LLARMYMFQN
VYFHSVVGMY NAILSQAIAQ LLRDGIIEMP VEVEDFLVFD DNFVISKLQH VRRELRDAIM
YRQGFRRIKI EPSPNCIEKL ESIKQEIRED MRSSGGLLIY HEFNDVPYRE EKDEAVYILT
PHGVERLKRV SPLIGSLSEI RKVVVGYHVS RDDLGRKYEK ILSECKD
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