Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1544 |
Symbol | |
ID | 5104071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1503797 |
End bp | 1504519 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640507430 |
Product | hypothetical protein |
Protein accession | YP_001191623 |
Protein GI | 146304307 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0146581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGTCG ATTTCGTTCG TGAAATTTAC AATGCAATGT TGAATGTAGA TGTAAATAAC ACTGCCTCAG GGGACGCTAA GAAGTCCCTC AATCTCATAC TTGAGGCAAT GAAATTAAAG ACCGAATTCC TCAGGACCGT AAAGGTTGAT ACTGAGGAGG AAATGAAGCA GGTTTTCGAT TCTGTCTTCT ACGCTAGGAA GCATTATGAT GACGTGTTAA GAAACACCGG TGTAACTGCG TTCTCCAAGG CTTTAGAGAC CCTTAGAGAT GATAACGTCT CTTACCAGGA GAGAGTGCAG AAGTTTGTCT CTGCTGTGAA GGCCTCTGAC CAAGAGGATA TTGAGGATAT GGCCAGGGAG ATAATTCACT ACCTATATCC TGAGGAGTAT CCCCTATGGA CTAGATGGAT CTGGAATCCG AAGAGGAACA CTGGTTCCAT TAACTATGTC CTAAAGGAAA ACCTAACGCT CAAGTCCACG GAGGAGTTCC TCTCCTCGGT AAACGAGCTC AAGAAGGTCC TTGAGGTTTT CGGTCTGTCC ACAGGCAACT ATTATCCAAC TTCTATTTTT CTTGTATACG CGTATGTGAG GTATTTAGAC TATACCACAC ACCTCGCAGT CGACAAAAAG GCTGCGGGGT TAATCCCCAC ACACCTCACA ACCACGGCCC TGGTTATGGG CCTAAAACCA TATATAAAGG TGATAAAACT TGCCCATACC TAA
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Protein sequence | MSVDFVREIY NAMLNVDVNN TASGDAKKSL NLILEAMKLK TEFLRTVKVD TEEEMKQVFD SVFYARKHYD DVLRNTGVTA FSKALETLRD DNVSYQERVQ KFVSAVKASD QEDIEDMARE IIHYLYPEEY PLWTRWIWNP KRNTGSINYV LKENLTLKST EEFLSSVNEL KKVLEVFGLS TGNYYPTSIF LVYAYVRYLD YTTHLAVDKK AAGLIPTHLT TTALVMGLKP YIKVIKLAHT
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