| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1503 |
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| Symbol | |
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| ID | 5104032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1467454 |
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| End bp | 1469019 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507391 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191584 |
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| Protein GI | 146304268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGTA AAAGAAACGT CTTTATAAGG GAAAGTTCTG GTCTCCTTAA GCAGGTCAAT
CTTCTTGACG CTGTGATGCT CAACATTGGT AATATGTCAG CTGGCGTCAC GCTATTTGAG
TCGATCTCCC CTTACATAAA CAACTACCCT GGTGGAGTCC TATGGCTCGC GTCAATAATA
GGCCTGGTTT TTGCGTTTCC ACAGCTCCTG GTTTATACCT ACATGACACG AAAGATGGGA
AGGACTGGCG GTGATTATGT CTGGATAAGC AGGAACTTGA ATGGGGCTAT TGGATCCACG
ATGGCGATAG CGCTCATGCT TGAGTCGGTT GCCTACTTTG CATTAGTGGC CTTCTTCTCG
GCGTCCAGCA TTAACGCAGT GTTATATACC ATTGGCAGTG TGGACAACTC CCCAAGCTTA
GTGTCCCTCT CAAACAACGT GTTTGTTAAC CCCTATAACG GCGGTCTCAC CTTTGAGCAG
AAGGCCCTAT TCTACGGAAT AGCTGCGGCG TTCTTCGTGA TCGTCATCCT GCTGAACATT
TTCAGATCCA GATGGGGTTA CTCCATTGTG ACAGGTTTCG GTATAGTATC GCTTTCAACC
CTTGTCATAG CGATGATCGT GATAGGAGCC TCGGCTGGGA GATTTGGAAC AGCCATAACC
CCGTTCCTTA ACTCTATCAA TTCAAGCTTA GTTAACGTTT ATCAATCCTC ACCACACACG
GCCTTCCCCA CGAACTTTAG CATAGTTTCA ACGGTGCTAC TATTACCGCT TTTCGCCCTA
TACACATACC CGTGGATGCA AGCTGGACCT GCGGTATCGG CTGAGTTTAA GCAAAGTGAT
AGGGTCGCCA AGTTCAACCT AGTGTTTGCC CTTCTTCTCA CAGCTATTCT TGTTACGGGA
GGCTTCCTGG AGATGGATCT GGTTGCGGGA TATCCCTTCA ACTTTGTTGC CTATCCCTAT
TTCATTTACA ATTTCTGGAC TGTTGCCATT GCACTGGCAG GAAATCCAGC CCTTCAATGG
CTCATTGGCA TAGGTGCCAT AGCCTGGAAC TTCTTCGTTT TAGCGTATGG TATAATAGTG
TTCTCCAGGT ACGTGTTCGC GCTCTCCTTT GACAGGATTC TTCCGGAGAA GTTCGCGGAG
GTAAACAGGT TCGGTTCACC CGTTTACGCC CATGCCCTCG ATTTAACCAT AACCCTACTA
TTCCTCCTGG TTCCAGTGTT CTCACTCAAT GCTGCCCTCT CGCTTTATGG AGCAACTATC
CTTGGCTCAA TCTATTTCCT AGTGGCCAGC ACAGCAGGTG CAATTTATGG TCTAAGAAAC
AGGGCCAAGG CGATATCCGT GGCTGGTGTA ATCTCGGCCC TCTACTTTGC CTTCCTTACA
TATGAGGCTG CCACTAACCC ACTGTTTGGC TTTACCACAT CAACAGGCTC GGTCAACTTG
ACCACATTGA TATTCGTGGT AGGGGTACTC GTAGTTGGCT TCCTGGTTTA CCTGGTATCT
AACTACAGAA ACAAGAAGAA GGGAATAGAT ATTTCTCTAG TGTTCAAGGA AATTCCTCCA
GAGTAG
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| Protein sequence | MSSKRNVFIR ESSGLLKQVN LLDAVMLNIG NMSAGVTLFE SISPYINNYP GGVLWLASII
GLVFAFPQLL VYTYMTRKMG RTGGDYVWIS RNLNGAIGST MAIALMLESV AYFALVAFFS
ASSINAVLYT IGSVDNSPSL VSLSNNVFVN PYNGGLTFEQ KALFYGIAAA FFVIVILLNI
FRSRWGYSIV TGFGIVSLST LVIAMIVIGA SAGRFGTAIT PFLNSINSSL VNVYQSSPHT
AFPTNFSIVS TVLLLPLFAL YTYPWMQAGP AVSAEFKQSD RVAKFNLVFA LLLTAILVTG
GFLEMDLVAG YPFNFVAYPY FIYNFWTVAI ALAGNPALQW LIGIGAIAWN FFVLAYGIIV
FSRYVFALSF DRILPEKFAE VNRFGSPVYA HALDLTITLL FLLVPVFSLN AALSLYGATI
LGSIYFLVAS TAGAIYGLRN RAKAISVAGV ISALYFAFLT YEAATNPLFG FTTSTGSVNL
TTLIFVVGVL VVGFLVYLVS NYRNKKKGID ISLVFKEIPP E
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