| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1423 |
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| Symbol | |
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| ID | 5104794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1392302 |
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| End bp | 1393477 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507312 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001191505 |
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| Protein GI | 146304189 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.210253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAG CTGTTGTTGG TTCGGGAACC ATGGGTCATG GCATAGCCGA AGTGGCTGCC
ATGGCGGGCA TGGAGGTAAA GCTAATCGAC ATATCCTGGG ACATCCTGAA CAGGGCCAAG
GAGAGGATGT ATGATTCGCT CAAGAGATTG CACGAGAGAG GTACCATAAG GGAAACACCT
GATACTGTAA TGAGTAGAAT AGAGATATCC GTGAGCTATG ACGTAGCTAA GGACGTTGAC
TTTGCGATCG AGGCTGTTCC GGAAATATTG GAGTTGAAGA GAAAGGTATT TCAGGAACTG
GACAGAGTGG TGCCCAAGGA GTCGATCCTG GCAACTAATA CTAGTTCAAT CCCTATCAGT
GATATCGGCG AGATCACCTC GAGGAAGGAG AAGGTCATAG GGATGCACTT CTTCAATCCA
CCGCCCCTCA TGAAGCTGGT TGAGGTTATT CCCAGCAAGT ACACCTCAGA GGATGTAACT
AGGTACACGG TGGAGTTGGC TAAGAAGATG GGGAAAACTC CAGTGAGACT TAGGGTTGAG
GTACCAGGGT TCGTGAGTAA TAGGATCTTT CTGAGGCTAC TGCAAGAGGC GTGCAGGGAG
GTTGAGAGCG GTGAGGCCAC GATTGAGGAA GTTGACTCAT CAGCCAGGAA CAAGTTAAAG
CTACCCATGG GCATCTTCGA GCTCGCAGAT TACGTTGGTC TAGACGTGGC GGTGGACCTG
TGGAAGGTCA TAGTGGAGAG GGGAGCCTCA GACGTTAAGT GCTCAAGCTA TAAGGAGAGG
GTGGACAGAA AGGAGCTTGG GGTCAAGACG GGAAAGGGAT TCTACACTTA CCCAGCACCG
GGCAAATACA GCAAGGTATC GCTGCCTCCC GAAAGCAAGG TTCCCCCGGA AAGGATCATC
TCTCTCGCGG TGAATGAGGG TGCCTGGTTA ATAGAGAACA ACATAGTCAA CGCAGAGGAG
ATAGACACGG TGATGAGACT TGGCTTTAAC TTCCCCAAGG GGCTCCTTGA GATGGCCGAC
GAGCTGGGAC TAGACAAGAT CCTCAACGCA TTAAGGGAAA TTCACTCTAG AGGGTATGAG
GCCTACTCAC CGAATCCCCT CCTGGTCAAG ATGGTATCCC AAGGCCAAAC TGGCAAGAGT
TCTGGAAGGG GATTTTACAC GTACGGTAAG ACTTAA
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| Protein sequence | MRIAVVGSGT MGHGIAEVAA MAGMEVKLID ISWDILNRAK ERMYDSLKRL HERGTIRETP
DTVMSRIEIS VSYDVAKDVD FAIEAVPEIL ELKRKVFQEL DRVVPKESIL ATNTSSIPIS
DIGEITSRKE KVIGMHFFNP PPLMKLVEVI PSKYTSEDVT RYTVELAKKM GKTPVRLRVE
VPGFVSNRIF LRLLQEACRE VESGEATIEE VDSSARNKLK LPMGIFELAD YVGLDVAVDL
WKVIVERGAS DVKCSSYKER VDRKELGVKT GKGFYTYPAP GKYSKVSLPP ESKVPPERII
SLAVNEGAWL IENNIVNAEE IDTVMRLGFN FPKGLLEMAD ELGLDKILNA LREIHSRGYE
AYSPNPLLVK MVSQGQTGKS SGRGFYTYGK T
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