| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1403 |
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| Symbol | |
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| ID | 5104613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1374394 |
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| End bp | 1374774 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507292 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001191485 |
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| Protein GI | 146304169 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000591811 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGGAAA TAATCTACTC GGAAAACTCT CCCAAGCCCA TAGGTCCCTA TTCCCAGGCC
GTGTTAGTTG ATAGGATACT TTTCGTGTCC GGTCAAATAC CACTAGATCC AAAGACTAAT
GAGTTGGTGA AGGGGGGAAT AGAGGAGCAG ACTAAACAGG TAATGGAAAA CCTTAAGGGA
ATCCTCTCGT CTACTGGGAT GACCCTAGAT AATGTAACCA TGAGCTTCGT TTACCTCAAG
AACCTCCAGG ACTTTCCCAA GTTCAATGAG GTCTACGCTA AATACTTCAA GGAAAAACCT
CCCGCAAGGG TAACAGTGCA GGTGGGAGAT TTACCAAGAG GATCTTTGGT AGAAATAGCG
GTTATAGCTT ACAAGTTTTA G
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| Protein sequence | MKEIIYSENS PKPIGPYSQA VLVDRILFVS GQIPLDPKTN ELVKGGIEEQ TKQVMENLKG
ILSSTGMTLD NVTMSFVYLK NLQDFPKFNE VYAKYFKEKP PARVTVQVGD LPRGSLVEIA
VIAYKF
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