Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1321 |
Symbol | |
ID | 5104572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1298117 |
End bp | 1299640 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507210 |
Product | vinylacetyl-CoA Delta-isomerase |
Protein accession | YP_001191403 |
Protein GI | 146304087 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2368] Aromatic ring hydroxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.46835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTCA GAACAGGGGA GCAATATCTC CAATCCATAA GTAACAGGTC AAAGGTGGAG ATTTACGTAA TGGGCAGGGA AGTCAAGGAC GTGACTAAGC ATCCCTTCCT TAAGCCTTCT GTAATGTCCT TTAAGGCTAC ATTTGACGCT GCTTGGGAAG AGGACACAAA GGAGTTAGGC AGGGCATGGA GTCCCTACCT AGAGGAGGAG ATAAACAGGT TTAATCATAT TCATAGATCA CCGGATGATC TGGCTGCTAA GGTTAAGTTG CTGAGAAAGT TGAGCCATAA AACAGGGGCA TGTTTCCAGA GATGCGTTGG TTGGGATTCC CTGAACACGC TTCACATTGT GACCACTATG ATGGCCAAGA AGGGCAAAAC CGAGGTGAGG GATAGATTTG TGGAATATCT CAAGTACGTT CAGAAGAATG ACCTTGCCCT TGCTGGAGCC ATGACTGACG CGAAGGGTAT TAGGAACCTT AAACCAAGTC AGCAACCCAA CAAGAACGCT TACCTCAGGA TAACCGAGGT CACAAAGGAT GGAATTTACG TGTCAGGTGC CAAGGCTAAC ATTACGGGAG TAGCGGCAAC AGAAGAGATG GTCGTGCTAC CCACTAGGGC AATGGGCCCG GAGGATAAGG ATTACGCAGT TGCGTTCGCG ATCCCGACAG ATACCGAAGG GGTCAAGATA GTCGTGGGGA GGCAACTGAA TGATGCGAGG AGAATGGAGG AGGGTGAGAT AGACGGACTT CCCTACTTCT ACAATCACGA GGGTCTAGTG ATCTTCGATA ACGTGTTCGT CCCCATGAAC AGGGTTTTCT TGGCAGGTGA GTGGGAGTAT ACGGGAACCC TGGTTGAGAT ATTCTCTGCC TATCACAGGC AGGGTTATGG TGGATGTAAG GCCGGACTCG GAGACGTGAT CATAGGGGCA AGTGCAGATC TAGCAAAGCA GATTGGAGTT GATAGGGCGT CCCACGTTCA GGATAAGCTC ACTGAGATGA TCTTCCTTAC CGAGACCATG TACTCAGCTG GAATCGCTGC GAGCCTTAAT GCCGTGAAAA TGTGTGATAA CTGCTGGTGG GTTAACCCCA TGCACGCTAA TGTCACGAAA CACCTGGTTG CTAGGTTCCC ATCCCAGATT GCACAGCTTT CCATAGACCT AGCAGGAGGA ATTGTGGGAA CAGCCCCCAG TGAATGGGAC CTAAAGAACC CCAAACTCAA GGAGTACATA TCCAGGTACC TCCAGGGAGC TGAGGACTTC ACGGCCGAGG ATAGGTTGAG GATGGTCAGG CTCGTGGAGA ACGTGAGCAT GGGTGTGGCT TTCCAGATAG AGTCTGTTCA TGGAGCAGGA AGTCCCGCAG CGCAGAGAAT AATGTTCTCC AGGTTGTATG ACCTGAACTT TGCCCAGGAA GTAGCGAAGA AGTTAGCAGG GAGAAAGAGC GAAGTGAAGT TCACGAGTAA GGCCGAGCCC TGGAGAGAGA GTCAGTCTGA GGCAGAGGCT AAGGAGGCCG GTCTCAAGAG TTAA
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Protein sequence | MVVRTGEQYL QSISNRSKVE IYVMGREVKD VTKHPFLKPS VMSFKATFDA AWEEDTKELG RAWSPYLEEE INRFNHIHRS PDDLAAKVKL LRKLSHKTGA CFQRCVGWDS LNTLHIVTTM MAKKGKTEVR DRFVEYLKYV QKNDLALAGA MTDAKGIRNL KPSQQPNKNA YLRITEVTKD GIYVSGAKAN ITGVAATEEM VVLPTRAMGP EDKDYAVAFA IPTDTEGVKI VVGRQLNDAR RMEEGEIDGL PYFYNHEGLV IFDNVFVPMN RVFLAGEWEY TGTLVEIFSA YHRQGYGGCK AGLGDVIIGA SADLAKQIGV DRASHVQDKL TEMIFLTETM YSAGIAASLN AVKMCDNCWW VNPMHANVTK HLVARFPSQI AQLSIDLAGG IVGTAPSEWD LKNPKLKEYI SRYLQGAEDF TAEDRLRMVR LVENVSMGVA FQIESVHGAG SPAAQRIMFS RLYDLNFAQE VAKKLAGRKS EVKFTSKAEP WRESQSEAEA KEAGLKS
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