| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1275 |
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| Symbol | |
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| ID | 5104688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1252631 |
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| End bp | 1254151 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640507166 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001191359 |
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| Protein GI | 146304043 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT TAAAATTTTC GTTTATTTTT ATTGTATTAT TTACAACTAT GTTCTTGTTA
TCGGTGTTAA TCCCTGCGAC TGGCTCGTAT ACATCTATGG GCTCGGGGAT AGTTGGAGAA
TCAGCTAATT CCTATAATTT AGTTCACCAA GGACTTGGGT CAGATTCGAC TAGCCATTCT
CGGTCAATGA ACTACATAGG CTTAGGTGTG ATGAACGATT ACACCTACAC TAGGTCAGTT
AATCCCATGA TATCGAATGG GAACAAGAGT GAACAAACAG GTATGGTTCC TAATAACGAT
CCATCAAGTA CATCAGGTTT TACAGTGTAC AACATATCTG TTGATGGTGG TCAGGATTAC
GCTATTTACG ATCCTTCTAA TGGTTATGTG TACGTAGTAA ATTACAATTC AAGTATACTG
TCTGTTATAT CAGGTACTAA GGTTGTGGCT AATATTAGTC TTGGTTATTT TACCACCCCA
CTTTATGCTG TTTACGACCC TTCCAATGGT TACGTGTATG TAACGAATTT TGCTATTGAT
ACAGTCTCTG TTATATCAGG TACTAGTGTT GTAGCCAATG TTTCTGTTGG TGTTGCCCCG
GAGTTTTTAG TTTACGACCC TTCCAATGGT TACGTGTATG TATCGAACCT AGATTCAAAT
AACATGTCTG TTATTTCGGG TACTACTGTT ATAGGTAACG TCCCTGTTGG TGTTGGCCAG
ACCTATTCTC TTTACGATCC TTCCAATGGT TACATATACG CGATTAACGG TAGCCCACAT
TCAAATTCAG TGATTGTCAT ATCAGGGACT AAAGTTGTAG CTAGCGTCCC TGTTGGTTCA
GACCCGACGT GTTTAGTTAA CGATCCTTCC AATGGTTACG TATATGTAAC GAACTTACAT
TCAAATTATA TGTCTATTAT CTCGGGTACT AAAGTTGTAG GTAATGTGTC TGTTGGTGTT
GGAGCGAGGG AGGCTGCATA CGACCCTTCC AATGGTTACG TGTACGTAGA CGTATTATAC
GCGCTTGGAA ATACATCAGT CTCTGTTATC TCAGCTAATA ATGTTGTAGG TAATTTGAAA
GTATGTAGCG GGACTCCTCC CATATACGAC CCTTCCAATG GTTACGTGTA CGTTGGTGGT
GCTCCTTCAG ATACAGTCTC TGTTATCTCA GGTAATAATG TTGTAGCTAA CGTCCCTGTT
GGCTTAGATC CAGTCTACGC TCTCTACGAT CCTTCCAATG GTTACGTGTA CGTAATGAAC
TACTATTCAA ATAATGTATC AGTAATTATG CCGAAAAGCT CTAGCACGTC TTCCCCTACT
TCTGGAACAC CTCCAACCAA TACGAGTTCG ACTACTTCCT CGACCAATTC GTCAAGTTCC
ACATCGACCT CATCCTCAGG CATCCCGTCT TCTACTTCCA GTAAAAGTAA TGGATCTCCT
TTCAATCTAA CATTCTTGAT TTTAATAGTC ACTGTTGTGG TTATTATTGC CTTAGCCTTC
GTGTTTATTA AGAAGAGATA A
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| Protein sequence | MKFLKFSFIF IVLFTTMFLL SVLIPATGSY TSMGSGIVGE SANSYNLVHQ GLGSDSTSHS
RSMNYIGLGV MNDYTYTRSV NPMISNGNKS EQTGMVPNND PSSTSGFTVY NISVDGGQDY
AIYDPSNGYV YVVNYNSSIL SVISGTKVVA NISLGYFTTP LYAVYDPSNG YVYVTNFAID
TVSVISGTSV VANVSVGVAP EFLVYDPSNG YVYVSNLDSN NMSVISGTTV IGNVPVGVGQ
TYSLYDPSNG YIYAINGSPH SNSVIVISGT KVVASVPVGS DPTCLVNDPS NGYVYVTNLH
SNYMSIISGT KVVGNVSVGV GAREAAYDPS NGYVYVDVLY ALGNTSVSVI SANNVVGNLK
VCSGTPPIYD PSNGYVYVGG APSDTVSVIS GNNVVANVPV GLDPVYALYD PSNGYVYVMN
YYSNNVSVIM PKSSSTSSPT SGTPPTNTSS TTSSTNSSSS TSTSSSGIPS STSSKSNGSP
FNLTFLILIV TVVVIIALAF VFIKKR
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