| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1253 |
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| Symbol | |
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| ID | 5103866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1229656 |
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| End bp | 1231344 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507144 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191337 |
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| Protein GI | 146304021 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAGT ACAAATGGAT TGCTTTATCA AACACTAGCC TTGGCGTCTT CATGGGCTTC
ATGAACGCCA ACATCGTGTT GATCTCTTTA CCGGCGATAT TCCGCGGAAT AGGAGTGAAT
CCCTTCAATT CATTTCAGTA CTTGTTGTGG ATTCTATTTG GGTATAGCAT AGTCTCAGCG
ATCCTCGTCG TGAACGTGGG GAGGATCTCA GACATTTTTG GCAGGGTGAG GATGTACAAC
CTTGGGTTTC TGATCTTCAC TGTGGCATCG ATACTCCTCT ACCTGACTCC CGGACAGGGT
GATGTGGCAG CCCTTCAGCT GGTGATTTAC AGGGTGATAC AGGCAGTTGG GGGAGCACTC
TTAATGGCGA ACAGCGCGGC GATCCTGTCA GAGGCTTTCC CTCCAAAGGA GAGGGGATTT
GCTCTAGGCC TCAACGGAGT CATAGGAATA TTTGGAGGAG TAGCTGGGAT AATTATAGGG
GGTATACTGG CCTCAATCTA TTGGAGAGAC GTCTTTCTAG TTAACGTCCC CATAGGAATC
CTAGGGACAA TCTGGTCAAT GAAGTCCCTC AAGCAACTGA GCAAACCGGA AAGGAACCAG
AGGATAGACA TTCCAGGTAA TGTCCTGTTC GCGGTCTCCC TGATCCTAAT CCTTGTGGGA
ATAACGTACG GGATACTCCC CTACGGGAAC CAGGCGACCG GGTGGTCAAA TCCATACGTA
ATCTCGGCGA TTGTGAGCGG GTTAGCCCTG TTGGGAGTCT TCCTCTTTGT GGAGACCAAG
GTTCCAGATC CCATGTTCAG GTTGGAGCTC TTTAAGATTA GGGCTTTCTC CATGGCCTCT
GCGTCGGTGA TCTTGGCCCA ATTAGCCTTT GGCGGTCTCC AGTTGATGCT TGTCCTCCTG
TTACAGGCCA TATGGTTACC CCTTCACGGT TACAGTTATG AGGTAACCCC ATTCTGGGCT
GGGATATATC TACTTCCTCT ATTGGCAGGG TTCGGAATAA TGGGTTCAAT TGCCGGAAAG
CTCTCCGACA GATATGGGGC TAGGACCCTA GCTACCCTTG GGCTGGTGAT TCTGGGAGTT
GGGCTTTTGG GACTCACCAC ATTGCCTTAC AACTTCAATT ATCTCGAGTT TGCCACAATC
ATCTTCTTCA TGGGTATTGG GAATGGACTT TTCGTGTCCC CGAATACGGC ATCCCTCATG
AATGCCTCCC CTCCACAACA CAGGGGATCG GCATCAGGGA TAAGGGCAAT GCTCACCAAC
ACGGGAAGTA CATTGAGTAT TGGTGTATTC TTCACAATAG TGATCGAGGT ACTTTACCTA
GTATTACCGA CAACCTTATC TACGGCATTG ACATCTGCGG GAGCTCCTCA GTTAATTCCC
TACATGACCA AGATACCGCC CACTGCAGCA ATATTTGCGG CGTTTCTTGG TTACAACCCG
GTTTCTGCCA TTCTGTCACA GCTTCCGCCT TCAGTTGCTA GTTCAATCCC AAGCTCAGTC
GTTTCCACGA TAACTGCGAA TACCTGGTTC CCGAACGTCA TAGCGCCTGC GTTCATGCAA
GCGTTGAGGA TAGCATTCTT CACCGCTTCA GGACTTTCCT TTGCCGCAGC AGTAGCCTCA
GCCCTTAGGG GTAAGACAGT GATTTATGAG GAGAGAGTTG TGGAGACTAC CAGGGGACAA
GGTAAATGA
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| Protein sequence | MVQYKWIALS NTSLGVFMGF MNANIVLISL PAIFRGIGVN PFNSFQYLLW ILFGYSIVSA
ILVVNVGRIS DIFGRVRMYN LGFLIFTVAS ILLYLTPGQG DVAALQLVIY RVIQAVGGAL
LMANSAAILS EAFPPKERGF ALGLNGVIGI FGGVAGIIIG GILASIYWRD VFLVNVPIGI
LGTIWSMKSL KQLSKPERNQ RIDIPGNVLF AVSLILILVG ITYGILPYGN QATGWSNPYV
ISAIVSGLAL LGVFLFVETK VPDPMFRLEL FKIRAFSMAS ASVILAQLAF GGLQLMLVLL
LQAIWLPLHG YSYEVTPFWA GIYLLPLLAG FGIMGSIAGK LSDRYGARTL ATLGLVILGV
GLLGLTTLPY NFNYLEFATI IFFMGIGNGL FVSPNTASLM NASPPQHRGS ASGIRAMLTN
TGSTLSIGVF FTIVIEVLYL VLPTTLSTAL TSAGAPQLIP YMTKIPPTAA IFAAFLGYNP
VSAILSQLPP SVASSIPSSV VSTITANTWF PNVIAPAFMQ ALRIAFFTAS GLSFAAAVAS
ALRGKTVIYE ERVVETTRGQ GK
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