| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1235 |
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| Symbol | |
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| ID | 5103849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1214340 |
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| End bp | 1215419 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507127 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001191320 |
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| Protein GI | 146304004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1106] Predicted ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTACTT CCATCAAGAT CAAGAACTTC AAGAGCTTCA GGGACGTCAC ACTTAATCTC
GGAAAAATAA GTGTAGTGGG CCCAAATGGT AGTGGAAAGA CTAACCTAGT TGATGCGTTC
TCCCTTCTAA AACAGGTTTT GAGACCCTCC TCGCTTTCAC CCTACCCTTT CGCGAGATGG
GGCGAATACA AGAACGTAGT GTTCATGCAA GATCCTGGTT TGGATATCTC CTTTGAGCTA
GAGGGAAAAC ACAAGGGAAT GGAGTACAGA TATTTCCTTG AGATCAACGG CGAGCACTCC
TTCACCGTGA AAAGGGAGGA GGTCAGGCTA GGGGACAGGG AAATAGAGAG GGAGAGAGAC
GCGGTCAAGA TTGGGGACAA AAGAATAGAG ATCCCCGTGA ACTACAGTGT TTTCAATTTA
TTTAACGCAC CTGATCCTGG CTCACCTGAT TTGCTCTCCC TTTCTCTGGA GGGCGAATTG
AAGGACTTCA TGCTAAACTT CTTCAACGAC GTCCTTATTC TTCGTTCCAC GGAGAGAGCC
CTACAACCTG CTCACGTCTC GGCTCCTGAG GGGATTGGGG AGGACGGGGC CGGTCTCCCC
AGGGCTCTGT TGGGGAAAAA TCTGCCAGGT CAGGTGAGTA ACTTCTTGGA CTCCCTAAAC
ATGAGCCTAA GGGTAACTGT CTCAGACGAC GGTAATGTTA CGATCTCCGC TGTGGGGGTC
GTGAATGGGA GAGAAATAGT CATTCCCCCA ACCTCGATCC CCTCGGGAGT GGTCGAGATG
ATAACCCTTC TGACCTCAAT CGACGTGCTT AAGCCCAGCC TGGTAGTTAT AGACGGGTTG
GAAAATTCCC TGCACCTGAA GTTCATGGAG AAGTTAATTG ACGTTCTTAG ATACTCTGAG
CCCCAGTTCC TGATCACAAC GCACTCGCCC CTGGTCATCG ACTTCCTGGA TCCCTCAGAG
CTCGTGATCC TTGATAGGGA GACTGGAGAG ACTAGGGTAA CCACGATTCA AGACCCTGAG
GGATTGAAGA AAAAGCTCCT GGAGGAGGGT CTGACCCTAG GCGAATGGAT CATATACTAG
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| Protein sequence | MITSIKIKNF KSFRDVTLNL GKISVVGPNG SGKTNLVDAF SLLKQVLRPS SLSPYPFARW
GEYKNVVFMQ DPGLDISFEL EGKHKGMEYR YFLEINGEHS FTVKREEVRL GDREIERERD
AVKIGDKRIE IPVNYSVFNL FNAPDPGSPD LLSLSLEGEL KDFMLNFFND VLILRSTERA
LQPAHVSAPE GIGEDGAGLP RALLGKNLPG QVSNFLDSLN MSLRVTVSDD GNVTISAVGV
VNGREIVIPP TSIPSGVVEM ITLLTSIDVL KPSLVVIDGL ENSLHLKFME KLIDVLRYSE
PQFLITTHSP LVIDFLDPSE LVILDRETGE TRVTTIQDPE GLKKKLLEEG LTLGEWIIY
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