| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1218 |
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| Symbol | |
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| ID | 5103832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1191264 |
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| End bp | 1192445 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507110 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001191303 |
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| Protein GI | 146303987 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.673164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGA TAACGTCTCT CCTAAACGTT GGGGAGGACG TGTCCCTTCT CCTCGAGTCC
CTCAGGGAAA TGATGGCCAA GTACCCGGAG AAATACTGGG GAGATCTCGA TCTCAAGGAG
GAGTTCCCCT CGTCCTTTCT ACACGACTTC ATGAGTCTAG GTTTCGGAAA CGTTCTCTTT
CCCAGGGAGT TTGGCGGTGG GGGGCTTGGG GTACTAGATG CCTCCCTACT CCTGAGGGAG
ATCAACTTGT TGGGGGGAAA CGCCTATTTC GTTCACGGTC AATACTACAA CGCGGTCCTC
CTTAACAGGT GTGCCCAGGA ATCGCTGAAG AGGAGGTATT ACCCCGAGAT CGTGGAGAAC
AACCTGAAGG TGCTTAGCCT TGCCCTCACT GAACCAGAAG TCGGCTCGGA CACAACGAAG
ATTAAGACCA CGGCACAGAA AGAGGGAAAT CGCTTCCTGA TCAACGGCCA CAAGATCTTC
ATTTCCAGGG TTGATAAGAC GGACTTCTTG ATCGTGGTTG CGAGGACCGA ACCCTACTCT
CGAGAGAGGA AGTCCCATGG AATTACCATG TTCCTCGTGG ACATGAGAGA TTTGAGGGGA
AGGATTGAGA TGAGGAGGAT AAGGACCATG GCCAACACTG ACGCATACGA GCTATTCATA
GAGAACCTCG AGGTTCCAGA TACCAACGTG ATAGGGGAGG TGGATCAAGG ATTCCAATGC
CTTCTATCCT GCCTGAACGC CGAGAGGATC ATGATAGCAT CTGAAATGAT AGGAAATGCG
GAGTATTTCC TAGAGAGGGG GACAGAATAC GCTAGAACGA GAGAGGTGTT TGATAGACCC
ATTGGACAAA ACCAGGGAGT ACAGTTCCCG CTAGCCCAGG GCTTCGCTGA CCTCGTAACG
TCAGCTCTCG CCCTGAAATA CGCAGGAGAG CTTTATGACT CCAACGCTGA TAATAGGGTT
GTTGGGACTT ACGCCAACAT TGCAAAGTAC AAGGCAAGTG AGACCGCGTG GTTCCTTGGA
AACGTGGTCA TGGACGTGTT CGGTGGGCTT GGATATGCTA GGGACACTGG GATAGAGAGG
AAATTGAGGG AGACCAGACT TTTCCTTGTT GCCCCTGTGT CCAGAAACCT GATACTTGCG
GACCTGGCGC ATAACGCCCT CAAGCTACCC AGATCCTTTT AG
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| Protein sequence | MNEITSLLNV GEDVSLLLES LREMMAKYPE KYWGDLDLKE EFPSSFLHDF MSLGFGNVLF
PREFGGGGLG VLDASLLLRE INLLGGNAYF VHGQYYNAVL LNRCAQESLK RRYYPEIVEN
NLKVLSLALT EPEVGSDTTK IKTTAQKEGN RFLINGHKIF ISRVDKTDFL IVVARTEPYS
RERKSHGITM FLVDMRDLRG RIEMRRIRTM ANTDAYELFI ENLEVPDTNV IGEVDQGFQC
LLSCLNAERI MIASEMIGNA EYFLERGTEY ARTREVFDRP IGQNQGVQFP LAQGFADLVT
SALALKYAGE LYDSNADNRV VGTYANIAKY KASETAWFLG NVVMDVFGGL GYARDTGIER
KLRETRLFLV APVSRNLILA DLAHNALKLP RSF
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