Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1201 |
Symbol | |
ID | 5104497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1173850 |
End bp | 1174938 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507093 |
Product | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit |
Protein accession | YP_001191286 |
Protein GI | 146303970 |
COG category | [C] Energy production and conversion |
COG ID | [COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
TIGRFAM ID | [TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.337765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGAAG ATGTAAAGTA TGTGGAGATA ACGTATAGGG GGATATTTCA GAAGAGGCTG GCCAAGTATA TTGCAGAGGG GTTAGTGTAC ATGTCGAGAT CCATGGGGAA GTCTGCCGTC TCCTTCGGAA GGTATGGAGA CTCTCCTGAG AGGAACGGAG TACCAGCAAA ATACTACGTG GCCCTGGGAA GCGTGAGCGA GGAAGATCTC ATAGGTTATT CCACTAGAGT TGAACCAGAG TACGTGGACG TTATAGCTGT TCTAGATGAT ACCCTTCTCA AGGGAGTTGA GTCTTGGGCA TGGCAGGGCG TTCAACCAAT CAATCTTAAG CTCAGGGAGG GTGGGGCCAT GATAGTTACC TCAAGGAAGC CCATGGAAGA GGTCGTGAAG CTGACTCCTT CAAAGGAATT TAACTGGACT CTAGGGAAAC TGAACTGGGA CAGATCATTC TCAGGGTTGT GGGCCTTCAA CGACGACACC ACAATGGAAA GGGTTTGGGG AGCCATAGCC AGGGTGAGGC CTGACATAGT GGATATCCAG CACGTGGTGG AGTATGTTAA GTCGCATAAG AAGGATAAGT TAAACGAGAG GTTGAAGGCT GTGGAGGAGG CGTATGAGGG GCTAGTCACA AAGACCATGA ATCCTGGAGA AGGTGTGGAA TTCAAGTACA ATCCTCCTAG ACTCCTAACC TGGCAAGAGA TGATGGAGGG GACAGCAATC CCCGCTGTTC CACGCGGAGG TAGAAACGAG CAGTTCAAGA GGGGAACGAC GAAAACGGAG AGACCCACGG TGGATTTTGA TGCCTGCATA AAGTGCGACC TATGCTGGGT CTATTGTCCT GACGGCTGTT TCGACAAGAC GCCAGAGGGT TATTACGACA TAGCCTATGA CTACTGCGTG GGATGCGGGA TTTGCGCAGA GGTATGCCCA GTGAAGAACT GCATAGTCAT GGTCGATGAG AAAAGACTAC CGGACTACAC AAGGCCTTAC TCCATGTGGA AGGCCAACAA GGCTGAGTAC AAGAAATGGC TCCAGAACGC GAGGCAAGAG GTAAGGGAAA GACCAATTGT ACCGGGGTTG GGAAGATGA
|
Protein sequence | MGEDVKYVEI TYRGIFQKRL AKYIAEGLVY MSRSMGKSAV SFGRYGDSPE RNGVPAKYYV ALGSVSEEDL IGYSTRVEPE YVDVIAVLDD TLLKGVESWA WQGVQPINLK LREGGAMIVT SRKPMEEVVK LTPSKEFNWT LGKLNWDRSF SGLWAFNDDT TMERVWGAIA RVRPDIVDIQ HVVEYVKSHK KDKLNERLKA VEEAYEGLVT KTMNPGEGVE FKYNPPRLLT WQEMMEGTAI PAVPRGGRNE QFKRGTTKTE RPTVDFDACI KCDLCWVYCP DGCFDKTPEG YYDIAYDYCV GCGICAEVCP VKNCIVMVDE KRLPDYTRPY SMWKANKAEY KKWLQNARQE VRERPIVPGL GR
|
| |