| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1163 |
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| Symbol | |
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| ID | 5103511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1126688 |
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| End bp | 1129348 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507055 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191248 |
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| Protein GI | 146303932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00163358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGGGGAA AACTTTACCT TCTGGAGGAT GGTTCAGACG TTCACATCGT GAACGAGGCG
AAGGCTAAGG CAATTGTGGA TGAACTGATG GATATACTCG CATATCTGGC CAAGATCATT
GACGACATGA CCAAACCAGA CGGATCTCCC CTTCCTCCAC AGAGCAAGGT GAGGCTGTTC
TCTGAGCTCG CCGTGGCCAT CTTCAATTTC CCTATAGTGA TAGGATACGC CACAGTTGTG
GAAAGGAAGT CCACCAAGGA GAGAGTTCTC ATAAACAACT TCGACTACCT AGTGGCATAC
GCCGTTGAGA GATATATTAA CGAGGGAATT AGGTCCGACC TTTACGAAAA GCTGAAGGAG
GGTAAACTGG AGGATGTACT GGAAACTCTA GAGAAGGCAC AGGCCATGAG GCTCGTAAGG
CACCTAAGCA GTATGAGGCC TAAACTTGCG GAGATCTACG AGGTGCTGAG GGCTATTCCG
TCCGATACTA GACCCGGACT AAACCTAACC TCGCTTCCCT CCCACATGCT CCTGACCTCT
GTGATTGCCT GGAGTCTTCA ATCGCAGGGC TACGATCTCC CTACCATAAG GCTAGCCTCA
ATATTTCACG ACGTTGGTAA GATCGCTAGC TACAGGAATC ACGTCAAGGG TGGGGAGGAA
TTCTTCGATC AACTCTTGGG CAAACTTGAG GTTTCCCGCG AGTTTAAGAG CGAACTTATC
AAGGTTGCAG GGAAGGCCAA GACCCATCAC CAGGGAGAGG GGTTCCTCGA CGTTGCCGAT
GACCTGTCCT CGGCTATGGA CAGAATCAGC TCCGTGGTAC AGAAGGCGGT TAAGGAGAAT
CCTGGGCTCA AGGATGTGGA AGAGTGTTTC AGGAGGAGTG GAAAGGAAAG CTTCGACTGC
TTTGACTCCC TTCCTCAAGA CAGGTACAAG GAGGCCACTC GGGCGATATT CGAAAAGTTG
AGGGAAGAAC TTGAAGGGTT AAAGTCGCCA GAGGGTGAAC CTGTCTTAAA CTTGGTATAT
ATTGACTTTC AGGGGATACA GAGGTTTATC TCATCCTTTC CGAAGCTCAA ACAGCTGTCC
ACTGCCAGCT TCCTCGTGGA CTTCCTTGTG TCCACTGTTC CCTTCATCGT AATAGACAAC
CTGATCTCTG GCTACAAGGA CAATTACCTA CCCCTTGAGG CTATGCTATC AGGTTACGGT
GGCCACTCAA TGCTTGCCGT GATCGCCAAA GTCGGAGATA AAACCCTGAG TAGGGAGGAG
CTGTCAAAGA GGATCATGGA ACTGAAGTTA CTGAAGTCCC TAGACGTGAA CCTTGGGGTA
TATGCTTCAC CAATGGTAGT TAAAGGCGAG GGGAGAGAGA AGGTTAGGCT CTACACCCAG
ATCTGGAGGG ACCTAGAGGC TCAGATGCTG GATAGATCCC TAGTGACCCT AGGAGAGAAC
GTTCTTGGGG TGTATAATCA CAAGCCGTGT CCCAACTGCG GTGTTAGGCC TGCGAATAGC
TCAGGGCTCT GCAGTAGATG TGACACAATT GACAAGATCT CGGATAAGAG AGGGTTCTCA
GCCAAGGTTG GTGTAGACTA CTCATTGAAC GGGATACAGG TTCGAATCTC CTTTAGACCC
AAAGACCCCA ACACACCCGA CCCAATGGAC TACCTAGCTG GTGATACTGG AAGAAAGAGA
GGGAAGAGAC CACATTACAT TTCCGTGGTT AAGTTTGACG CCAACAACGC ATCTGCTATC
TACATGAGGG CAATTACCCT GGGCCTGTTC CTGGACATCA GTTATACCAT GGACTTTGCC
ATTAAGCAGG GCTTTTACGA GACCCTTACC CAACTCCTTG GGGCAGGCTC AACCATGAGC
TCTGAGAAGC AGGAAGGCGA ACCTGCGGAG GCAACGGGTT CAAGGAATAA CAATAACGAT
CTTGAGGAGG CGTCCCACTT CCTGGCAGAA AGGATCCTAG TTGGGGTAAT CTACCTTGGA
GGTGATGAGG GGCTCCTCAT AATCCCCGCG ATTATCTCGA TCCCCTTCTC CCTCGTGTTC
CTGGAAAGGG TAAGCGAGAG GTCAAAATTC AAGTTCAAGT GCGGAGTAGT CACGGTGAAA
CCTAATCATC CCATACAGTT CGCGATTCAG GGGGCTGAGG AAGTCATGGA GAAGGCCAAG
CTTAGCCTGG GCACAATAAC TGAGAACACG ATCGGCATAG TTCACGCCTC CTCTGGTCTC
GTGACCGATG AGACCGTTGA GACTACCATG GGGAAGTATG CCGATGTCTT ACAGGTGACC
AATGATCTCA AGTTCTTGAG GGAAGTGCTG AGTGCGATCA TGGGGATTCA GGACTCAGAT
CTCCTGCGGG AAGTTGTGAA GCTTTACCAA GACACAATGA ACGAAGAGCC TAGATTTGAA
GTAACCGAGA GGGTTAAGGA TGCCATAAGG ACATTTGAGG ACGTGGTATC CGCGTATGCA
GGGAAGAGGA ATAGGCTTCA CCTCATAGCT TACCTCCTGA AGAGGAGGGC CGATTACCAG
GAGTTAAAGA AGCAAAACGT CGTCGACGCG ATAGAGATCA TTCTAAGAAG GGTAGCCAAC
TCAGATGACG TCCTTAAGGC CAGTCTACCC GTCCTCGATG TCATGTTTCT TCTAAAAACC
TTGAGGAGTG GTATGCAATG A
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| Protein sequence | MRGKLYLLED GSDVHIVNEA KAKAIVDELM DILAYLAKII DDMTKPDGSP LPPQSKVRLF
SELAVAIFNF PIVIGYATVV ERKSTKERVL INNFDYLVAY AVERYINEGI RSDLYEKLKE
GKLEDVLETL EKAQAMRLVR HLSSMRPKLA EIYEVLRAIP SDTRPGLNLT SLPSHMLLTS
VIAWSLQSQG YDLPTIRLAS IFHDVGKIAS YRNHVKGGEE FFDQLLGKLE VSREFKSELI
KVAGKAKTHH QGEGFLDVAD DLSSAMDRIS SVVQKAVKEN PGLKDVEECF RRSGKESFDC
FDSLPQDRYK EATRAIFEKL REELEGLKSP EGEPVLNLVY IDFQGIQRFI SSFPKLKQLS
TASFLVDFLV STVPFIVIDN LISGYKDNYL PLEAMLSGYG GHSMLAVIAK VGDKTLSREE
LSKRIMELKL LKSLDVNLGV YASPMVVKGE GREKVRLYTQ IWRDLEAQML DRSLVTLGEN
VLGVYNHKPC PNCGVRPANS SGLCSRCDTI DKISDKRGFS AKVGVDYSLN GIQVRISFRP
KDPNTPDPMD YLAGDTGRKR GKRPHYISVV KFDANNASAI YMRAITLGLF LDISYTMDFA
IKQGFYETLT QLLGAGSTMS SEKQEGEPAE ATGSRNNNND LEEASHFLAE RILVGVIYLG
GDEGLLIIPA IISIPFSLVF LERVSERSKF KFKCGVVTVK PNHPIQFAIQ GAEEVMEKAK
LSLGTITENT IGIVHASSGL VTDETVETTM GKYADVLQVT NDLKFLREVL SAIMGIQDSD
LLREVVKLYQ DTMNEEPRFE VTERVKDAIR TFEDVVSAYA GKRNRLHLIA YLLKRRADYQ
ELKKQNVVDA IEIILRRVAN SDDVLKASLP VLDVMFLLKT LRSGMQ
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