| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1073 |
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| Symbol | |
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| ID | 5104454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1001637 |
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| End bp | 1003019 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506968 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001191161 |
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| Protein GI | 146303845 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCAG TTATAGTGGG TGGAGGGATT GGCGGACTCT CCACGGCCCT CCTCCTCAAG
GGAAAGTTTG AGGAAGTGAC TGTAATAGAG AAGAACTCCA GTGTGGGAGG CAGGGCGAGG
TCATTCAAGG CAGGAGAATT CAAGTTTGAC ATGGGGCCTT CCTGGTATCT AATGCCCGAG
GTCTTCGAGA GGTTCTTCCA TGAGGTAGGC GAGAGTCCCC ATCCCGTGAT TGAGGTCAAT
CCCCTAGTGC GGGTGGAGAA TGGTAAACTG GGGGAGAAAG GCGAATCCAT AACCTTCCAC
GAGATCACAG AGGAGATGGA GGGTTACCTG AAGGACACGG GTTTCATGTA TGAGGTTTCC
CTTAGAAAGT TCCTAAACAA GGAGATGACC TACCTTGACT TCCTGGACAA GGAGATTCTA
TCAAATCTCG GGAGGATTCC CCTGTGGGAG AGCCTAGATA AGTTCAACTC AAGGTACTTC
AACACCGACC TCATGAGGAA GGCCATGGGT TTCTCATCCG TTTTCCTGGG TGGTTCTCCC
TTCAATACTC CTGCCGTGTA CGCCATGGTA AATTACGCGA TTTACGGTAA GGGCGTGTAT
TACCCAAAGG GAGGGTTTGA GGGGTATGTG GATAAACTGT ATCAGGCGTG TAAGAGGGCG
GGAGTAGAGT TCAGGCTAAA TTCACCCGTC ACGAAGGTAA AGGTTGACGG GAACAGGGTT
AAGTCAGTGG TCACGCCCTC AGGCGAGGTT GAGGGCGACG TTTTCGTGTT TAACATGGAT
TACCACTACT CTGATACCCT GTTACCTGAC GAGTTTCAGG TTGAAAGGGA GTGGTGGAGG
AAGAGGCTGG CCCCCTCGAC GATCCTAGGT TACCTTGGGG TTGAGGGCGA GATGAACTTG
CCACATCACA CGGTGGTCGT GAACGGAGAT TGGAAAGACC ACTTCAACTC CCTAGAGGAG
AGGAGATTGC CTACCCCCGA GAACATGTCC TACTACGTGA GTTACAGGAG GGCTACGGAT
GAGAACCTCC TGGGGAGGGA CCTTGTGATC CTAATACCAG TGGCTCCGGG TACCAGAACG
AACCCAGAGT TAGTGAGAGT GGCACTGAGG GACCTTGAGA TCAAGACCGG TAGTAAGATA
CAGGTCAAGT ACTCGAGGAT TTATGGTCCC GAGGACTTCG TGAGCGATTA CAACGCGTAT
CAAGGGACTG CCTTTGGGTT ATCCCACACC CTGAACCAGA CAGGTCCCTT CAGGTTACCT
ATGAGGAACA GGAAACTCAG GAACATGTAT TACGTGGGCC AATATACCCA ACCTGGAATA
GGAGTTCCCA TGGTGACACT CTCGGCCTTG CTCGTCAGGG ATAAGATACT GAAGGAGTTG
TGA
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| Protein sequence | MRAVIVGGGI GGLSTALLLK GKFEEVTVIE KNSSVGGRAR SFKAGEFKFD MGPSWYLMPE
VFERFFHEVG ESPHPVIEVN PLVRVENGKL GEKGESITFH EITEEMEGYL KDTGFMYEVS
LRKFLNKEMT YLDFLDKEIL SNLGRIPLWE SLDKFNSRYF NTDLMRKAMG FSSVFLGGSP
FNTPAVYAMV NYAIYGKGVY YPKGGFEGYV DKLYQACKRA GVEFRLNSPV TKVKVDGNRV
KSVVTPSGEV EGDVFVFNMD YHYSDTLLPD EFQVEREWWR KRLAPSTILG YLGVEGEMNL
PHHTVVVNGD WKDHFNSLEE RRLPTPENMS YYVSYRRATD ENLLGRDLVI LIPVAPGTRT
NPELVRVALR DLEIKTGSKI QVKYSRIYGP EDFVSDYNAY QGTAFGLSHT LNQTGPFRLP
MRNRKLRNMY YVGQYTQPGI GVPMVTLSAL LVRDKILKEL
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