| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1067 |
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| Symbol | |
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| ID | 5104448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 996981 |
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| End bp | 998171 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506962 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191155 |
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| Protein GI | 146303839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGGG ACGTCTTTTT ATTAATGATC TCGAGGGTTG CAAGGAGCTT CGCAGCGGGT
CTTCTTGCTG TCATTGTGGG GTTGTATTAC GTTCATGTAC TTCACTTGTC GCTTCTCCAG
GTAGGAATAC TGTTTGGCGT TGGGGCGTTC GTCACCCCCC TCCTCACGTT GATCCTGGGA
TTCTACTCCG ATAGGTATGG AAGAAAGAAA ATATTGCTCA TTACCCTCTC TTTCCTTCCC
TTGTCCGTGT TGATTCTGCT CCTCACATCC AACTTCTTTC TACTCATGTT GTCCTCAGCC
CTTGGCGGTT TCGGGATAGC GGGAGGTTTA GTCGGAGGAG GTGTAGGTGC AAGCGTCGCC
CCCATGCAAA CTGCCCTCCT CACCGAGAAG GTGAAGCCTG AGGAGAGAAC GAAGATTTTT
TCGTGGTTCA CAATAATCTC CAGTTACGCA GGTTCCGCTG GAGCACTCCT GGCGAACGGT
TCGAGTTACG AGGAGTTATT TATCATTTCT CTTCTAGTGT CGGGTCTCTC AGCCCTCGCG
GTTATCCCTG TGAAGGAGAA CTTCAAGCCG AGAAGGAAGG AGGAACCTAA GGCCGCAAGT
AAAGATAACG ATGTTATTAA GAAGTTTACC CTCACTGGGA TTCTGAACGG GGTATCACAG
GGGCTCATAG TCCCATTCAT ACCCATCATC TTTAGTGAGG TATACGGTCT ATCACAGGGC
TTCATTGGAG ATCTCGTATC CCTGGGAGGG GTTATATCTG CGAGCGCCAT GCTTGCCACT
CCCGCGTTAA CGGAGAGGCT GGGATTCGTG AGATTAATCA TAATCACAAG GACAATATCT
GCGGTCATGG TACTTCTTTT CCCCTTCCTT GGAGTGTGGT ACCTTGCCTC CATAGACTAT
GTTCTGTTTA CCCCACTTAG GGTTATAGCA CTACCAGCCC AGCAGGCATT AATGATGAAC
CTGGTGGGAG AGGGTAGGAG GGCGACTGCC ACAGGAGCTA ATCAAGCTGG TAGACTCATA
CCCGCAGCTG CGTCAACTTC TCTCTCAGGC TACATAATGC ATGCTCTCTC GTTTGCCATA
CCCTTCGAGG CGGCCTTTGT TGCCACAATT GTGAACTCGT TTCTCTATTT TAAGTTCTTC
AGGGGTGTAG ATAAGGCGGT AGCCGGGAAA GTCGTACTGT CGGAGGGATA G
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| Protein sequence | MQRDVFLLMI SRVARSFAAG LLAVIVGLYY VHVLHLSLLQ VGILFGVGAF VTPLLTLILG
FYSDRYGRKK ILLITLSFLP LSVLILLLTS NFFLLMLSSA LGGFGIAGGL VGGGVGASVA
PMQTALLTEK VKPEERTKIF SWFTIISSYA GSAGALLANG SSYEELFIIS LLVSGLSALA
VIPVKENFKP RRKEEPKAAS KDNDVIKKFT LTGILNGVSQ GLIVPFIPII FSEVYGLSQG
FIGDLVSLGG VISASAMLAT PALTERLGFV RLIIITRTIS AVMVLLFPFL GVWYLASIDY
VLFTPLRVIA LPAQQALMMN LVGEGRRATA TGANQAGRLI PAAASTSLSG YIMHALSFAI
PFEAAFVATI VNSFLYFKFF RGVDKAVAGK VVLSEG
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