| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1050 |
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| Symbol | |
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| ID | 5104432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 978591 |
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| End bp | 979523 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506946 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001191139 |
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| Protein GI | 146303823 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.863922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCTTGCCA CCTATACTAA CCTTGTTGAA ACGGAGAACC TAGGAGTAGA GTTCACTGCG
GGAGGTAGAG TCATAAGGGC AGTAGACGGA GTCTCTCTGG GAATAGGTGA GGGAGAGACT
TTCACTGTGA TTGGTGAATC GGGAAGTGGG AAATCTACCC TTGCCTTGGC CATTCTAAAG
CTCATCAAGA TCAAGTCAGG GAAGATCTTC TTCAAGGGAC AGGATATAAC CAAGCTGAAG
GAGTCAGAAA TGAGGTCAAT AAGAAGAGAA ATGCAGATAG TCCTTCAGGA TCCCTACCTG
AGCCTGGATC CTAGGTTGAG GGTGGGAGAT ATAGTCAAGG AACCCCTACT ACCCCTAGGG
GAGAAGGGAG ATGATAAGGT GGATGAGGTA CTTAGCCTGG TAGGGCTAGA TCCTGGGGTG
GCAACAAGGT TTCCCCACGA GTTCTCAGGA GGACAGAGAC AGAGAATAGC CATTGCTAGG
TCGCTTATCA GTGATCCCAA GTTCATAGTG TTGGACGAGC CTACATCTAA CCTTGATGTC
TCCATTCAGG CCCAAATACT AAACCTCCTC CTTGATATCC AGGAAAGGAG GAAGGTATCC
TATCTCCTCA TAACACATAA CATGTTAGTG GCAAAGTACA TGTCCGACAA CGTGGCAGTG
ATGTATTCAG GAAAGATTGT GGAAAGGGGT TCAGCAAGGG AAGTAATAGG AAAGCCGTTA
CATCCTTACA CTATGGAGTT ACTCAATGTA ACCCCTACGA AGGGCTTTAT GGAAAGGATT
AGGAAAATGG AGTTCATACA AGAAGGCGAG ATACCCATCA AGGGTTGCAG ATACGCCAAC
AGGTGCAGGT TTGCAAAGGA AGTGTGTAGG ACCACCGAAC CCACTCTGAA GAAGGTCTCT
CAGGATCATG AAGTAGCCTG TTTCTTGTAT TAA
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| Protein sequence | MLATYTNLVE TENLGVEFTA GGRVIRAVDG VSLGIGEGET FTVIGESGSG KSTLALAILK
LIKIKSGKIF FKGQDITKLK ESEMRSIRRE MQIVLQDPYL SLDPRLRVGD IVKEPLLPLG
EKGDDKVDEV LSLVGLDPGV ATRFPHEFSG GQRQRIAIAR SLISDPKFIV LDEPTSNLDV
SIQAQILNLL LDIQERRKVS YLLITHNMLV AKYMSDNVAV MYSGKIVERG SAREVIGKPL
HPYTMELLNV TPTKGFMERI RKMEFIQEGE IPIKGCRYAN RCRFAKEVCR TTEPTLKKVS
QDHEVACFLY
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