| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1049 |
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| Symbol | |
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| ID | 5104431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 977618 |
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| End bp | 978610 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506945 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001191138 |
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| Protein GI | 146303822 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.933184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAG AGCTAACGCT TAGGGTAGAG AACCTTTGGG TGTCCTATTA CCTAGAGGGA
AGGGAGGCCT TCGCAGTGAG GGATGTTTAC CTAGACGTAG GGAAGGGAGA GGTAGTGGGA
ATAGTGGGAG AGAGCGGTTC AGGAAAGAGC ACCCTAGCTC ATGCCATCAT AGGCTTACTT
CCCAGGAATT CAAGGATATC TAAGGGAAGA ATTCTGTTTA AGGGAAAGGA TATTACAGGA
ATTAAGACGG ACCAAAGATA TCTCTACAGG GGTACAAACA TCTTCATGAT ATTTCAGGAT
CCAATGTCAA GCCTTAATCC CACAATGAAG ATTCGCGACC AGTTACAGGA AGCAATAGAC
GTGAGGTTGG GAAAAAGGGG ATGGAATATT GGAACGTGGA GACCTCCAAA GGGGAATAAC
GAAGAGGAGA TCGTGGATTC GTTGGAAAGG GTAGGGATAA AGAGGCCTAG GGTCATAATG
GAGAAGTATC CTCATCAACT TTCAGGTGGG GAGAGGCAGA GGGTCATGAT TGCCATGGCC
TACCTCTTAA AACCTTCCCT CCTCATTGCG GACGAACCAA CCACTGCGTT AGATATGATA
ACCCAAGCAC AGGTAATGAG GCTAATCACG GAGTTGAGGG AGAGTCTGGG ACTTTCTGTT
CTCTTTATAA GTCACGACAT AGTCCTTGTG GGGCAGATAG CCGATAGAAT AGTGGTAATG
TATGCGGGGA AAGCTGTGGA GGAGGGTAAA GCTGAGGAGA TAGTCGAGTC CCCCATGCAC
CCCTACACTA AGGGTCTAAT TAACTCGATC CCAGATGGCT ACAAGAACGA GAAAAGAATT
GAGTCAATTC CTGGATCTCC ACCCAATATT CTTAAACTGC CTCCAGGTTG TTCCTTTAAT
CCAAGGTGCA AGTTTGCCAT GGAGAAGTGC ATGTCAGAGG ATCCGGAAAC TAGAGTTTTA
GGAGGGAGAA AGGTTGCTTG CCACCTATAC TAA
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| Protein sequence | MSEELTLRVE NLWVSYYLEG REAFAVRDVY LDVGKGEVVG IVGESGSGKS TLAHAIIGLL
PRNSRISKGR ILFKGKDITG IKTDQRYLYR GTNIFMIFQD PMSSLNPTMK IRDQLQEAID
VRLGKRGWNI GTWRPPKGNN EEEIVDSLER VGIKRPRVIM EKYPHQLSGG ERQRVMIAMA
YLLKPSLLIA DEPTTALDMI TQAQVMRLIT ELRESLGLSV LFISHDIVLV GQIADRIVVM
YAGKAVEEGK AEEIVESPMH PYTKGLINSI PDGYKNEKRI ESIPGSPPNI LKLPPGCSFN
PRCKFAMEKC MSEDPETRVL GGRKVACHLY
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