| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1011 |
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| Symbol | |
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| ID | 5105610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 931210 |
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| End bp | 932085 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506910 |
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| Product | undecaprenyl pyrophosphate phosphatase |
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| Protein accession | YP_001191103 |
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| Protein GI | 146303787 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00382837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTGCAAAC CCTATTTTTC TGAACACGTC TTACCGCGCA TGAACTACGT CTTAGTTGGT
ATAGTTCTCG GTCTAGTTCA AGGAATCAGT GAGTGGTTGC CCATTAGCAG TAAAACCCAG
GTCTTGATAG CCTCAACCTT TCTCCTGGGC TTACCCTTCT CCCTGGCATA CGCCTTCGGC
CTCTTCATGG AGATTGGAAC CATTTTCGCT GCGGTGATAT ACTTCAGGCG AGAGATAGTT
AGGCTGGTGA AGGCCCTGGT GGGTAGGGGA ACATCGCAGG ACGTCAAGTT GCTCAAGTTC
GTCGTAGTCA TTACGCTGAT AACGGGGATG ATCGGTGTTC CGCTCTACCT TTTCGTGATA
AACTTGGTCA CGTCTGCGGT CGTGGGAATT CCCATGACTG TCCTTGGGGT AATCCTAGTC
TTGGATGGGA TAGTGATCTA CTTAACAAGG AAGAGATATG TTCCCAGAAG AGGGTTGAAT
GAACTCACGT GGAGAGACAT GGTGATCGTG GGGATAGCTC AGGGGTTGGC AGCGCTCCCG
GGAGTTAGCA GATCTGGGAT GACCACCTCA GCCATGATCC TCCTAGGGGT AAAACCAGAG
GAAGCGTTCA GGCTCTCCTT CCTTTCCTTG ATTCCGGCTG CGCTCGGAGC AATAGGTGTC
ACCGTGATAT TTAGTAAGGC TGAGGTAGTG CAAGCCGTCC ACCTCATAAA TGTGACAGGA
CTTGCCGTAT CCATGATAGT TGCCACGGGA ATTAGCTTGG TTCTCATTGA CGCGCTCCTC
AAGTTCGCGA GATCAGGTAG AGTCCTCATC CTGGTATTTA GCCTAGGAGT GCTCGCGATC
ATTAGTGGGA TACTTAGCTC GATCTTTGGA GGTTAA
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| Protein sequence | MCKPYFSEHV LPRMNYVLVG IVLGLVQGIS EWLPISSKTQ VLIASTFLLG LPFSLAYAFG
LFMEIGTIFA AVIYFRREIV RLVKALVGRG TSQDVKLLKF VVVITLITGM IGVPLYLFVI
NLVTSAVVGI PMTVLGVILV LDGIVIYLTR KRYVPRRGLN ELTWRDMVIV GIAQGLAALP
GVSRSGMTTS AMILLGVKPE EAFRLSFLSL IPAALGAIGV TVIFSKAEVV QAVHLINVTG
LAVSMIVATG ISLVLIDALL KFARSGRVLI LVFSLGVLAI ISGILSSIFG G
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