| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1007 |
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| Symbol | |
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| ID | 5105606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 927260 |
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| End bp | 928003 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640506906 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
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| Protein accession | YP_001191099 |
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| Protein GI | 146303783 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0235176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGTTC AACACGAGAA TAGCCTCGCC CTGGTAACTG GAGCGGGGAG CGGAATAGGT
TTGGCCATAG CACGTAAACT CGGGGAGAAG GGATTTAAGG TGGCCATAGG GGATCTCAAG
AATTATGAGG AGAGTGCCGA GAACCTGAGA AAGCTTGGTC TCCACGTGGT GGGTCTACCA
CTGGACGTAA CTAACTGGGA CTCATGCAGT GAGTTCGTCG AGGCCTCCAT GGCCCACTTT
AAGACGGATC ACGTTGACGT CCTGGTTAAC AACGCTGGCA TTATCCGTGA CTCACTCTTC
GTAAAGATGT CGAGGGAGGA TTGGGACGCC GTTATCAAGG TTCACCTCTA CGGGGCCTTT
AACATGACCA AGCAGGTGGT TGAATCCATG ATCTCCAAGG GACACGGTAG AATCATAAAT
ATGTCGTCCC TGAGCTGGAC CGGAAACGTG GGCCAGGCTA ACTACTCTGC GGCGAAGGCT
GGCCTCGTTG GTTTCACCAA GACCCTCTCC AAGGAACTTG GAAGATACAA CATCACGGTT
AACGCCATTG CCCCAGGTTT CATTGATACC CCCATGACCA GGACTGTCCC AGACAAGATA
AGGGAGAAGT TCATGGAAAG GCTCTCCATC AAGAGGATAG GCGAGCCAGA GGACGTGGCC
AACCTAGTGG CGTTCCTGGC CAGTGATGAG GCCTCCTACA TTACGGGAGA GTTAATTGGA
GTTACGGGAG GACTCACCTT CTAG
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| Protein sequence | MGVQHENSLA LVTGAGSGIG LAIARKLGEK GFKVAIGDLK NYEESAENLR KLGLHVVGLP
LDVTNWDSCS EFVEASMAHF KTDHVDVLVN NAGIIRDSLF VKMSREDWDA VIKVHLYGAF
NMTKQVVESM ISKGHGRIIN MSSLSWTGNV GQANYSAAKA GLVGFTKTLS KELGRYNITV
NAIAPGFIDT PMTRTVPDKI REKFMERLSI KRIGEPEDVA NLVAFLASDE ASYITGELIG
VTGGLTF
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