Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0998 |
Symbol | |
ID | 5104547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 921205 |
End bp | 921468 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640506897 |
Product | HEPN domain-containing protein |
Protein accession | YP_001191090 |
Protein GI | 146303774 |
COG category | [S] Function unknown |
COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0345509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0093347 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGGGA TCAGGATTCA ACTGCTTAAG GCGAGGGCTT TACAGTTTCT TGAAAATGCT AGACTTAACG TGGAAAAGGG ATATTATGAT TTGGCCGTGT TTAACTGTGA ACAATCACTT CAACTCTATC TAAAGGCGAT ATTACAGGAA CCCTTTGCGT CCGAATTCAG ATCTCATGAG CTTAAATCAC TCCTGTCTCA TCTCTCTAAG CTGTTGGGAG AGCGAGTTTC AGGAGGCACA GAGGGAAATA GATGCGTTGA CTAG
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Protein sequence | MSGIRIQLLK ARALQFLENA RLNVEKGYYD LAVFNCEQSL QLYLKAILQE PFASEFRSHE LKSLLSHLSK LLGERVSGGT EGNRCVD
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