| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0993 |
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| Symbol | |
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| ID | 5104542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 916253 |
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| End bp | 917746 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506892 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191085 |
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| Protein GI | 146303769 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000427964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0333525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATT CTCCAATTAT GGCAGAAAAG TCTGTGAAAG CCGGGGAAAT AATCGCCCGG
ATGGACAGGT TACCCATCTG GTCACTCTCG TACATTTTCA TTGGAATACT GGGGATGGGA
TTTCTCTTCA CATTTTTTGA TATTTTTGAC ATTAACGTCT CATTTATCCA GACATCTCTC
ACCATATTTC ACGTTAGTAG TCCATCCTCG CCAGAGATTG GGGTTCTACT GGGACCGGCA
GTTCTCCTTA ACCTGGTTGG ATATATTGTG GGCTCCCTAC TCCTTTCCCC TCTCTCGGAT
CGGATAGGCA GGAGGAACAT GTTAATGATA ACCATGGCCA TCACGGGGCT CGGGAGTCTG
TACAACGCAC TTGTTAACGA TTATTCTAAC TTCCTCCTGG CTAGGACTAT CACAGGAATA
GGAGTCGGAG CAGACCTAGC AGTGGTCAAC ACTTACATAG GCGAAGTTGC TCCACTAAAT
GGGAGGGCAA AGTACACCAG TTTCGTGTTC CTGTTCTCAA CTCTTGGGGC TGGGTTGGGT
CTCTGGTTAG GACTCCTGTT AACAACTCCA CCTGCTCCAT TTCCCCTAGG TTTACCCTTC
GCTCTAGGAG GATCTGGCTT CCTTGCCGTA AACGGGTGGA GGGTGATGTA CGGAATTGGC
GCTCTCCTAG CCTTGATAGG CTTGCTCCTC AGGTTCAATC TTCCTGAATC TCCTAGATGG
TTGATATCCC GCGGTAGGAT AGCTGACGCC GAGGCCGTGG TAAAACAAAT GGAAGAGAGA
GCGTCGAGGA AGCTAAGGTC TCTTCCTCCA CTTCCCGCGG TAATACCCCC TTACGTTGTG
GAGAGATTGT CCTATCTCGA CTCGTTAAAG GCAGTGATAC TGGATAGGAG GTATGCGAGA
AGGCTCGCGG TCCTAATCCC GATGTGGTTC TTTGGCTACA TGACAGTTTA CGTGTTAGCA
GCAGGATTAA CCACTATCCT GGCGTCCCTA GGATATCCTC CGCCCGAGGC CGGTATCATT
GCCTCCTTTG GGGATATAGG GTTCATCCTA TGCGCAGTAA CCATCATGTT GGTTGGGGAT
AAGATGGAGA GGAGCAGGTG GACTGCAATC TCAGTTCTCT TTACCATAGT GGGGGGCGTG
GTGATAGCGT TAGCGAAGAC CAACTTACCG TTATCTTTCC TGGGATCGTC AATACTGTTC
TACGGCTTCA ATCTATGGGT TCCAGTGTCA TATGCGTGGA GCGCTGAGAG TTTTCCAACA
AGGGCTAGGG CGACAGGTTT CGCCCTCACC GACGGGCTGG GGCATATAGG AGGAGGAGTA
GGGACAGTTG TTGTAGCGTC TTTTGTGGCG TCCCTAGTGT CCAGTGGTGT CACCACGGGA
TTGGCAATTG AGGTTTTCCT GCTCATAGCG TCCTTCCAGA TAATCTCAAC AGTGATTGCA
GTATCCCTAG GACATAAAAC AGCTAATAAA AGGTTGGACG AAATATCTCC GTGA
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| Protein sequence | MNNSPIMAEK SVKAGEIIAR MDRLPIWSLS YIFIGILGMG FLFTFFDIFD INVSFIQTSL
TIFHVSSPSS PEIGVLLGPA VLLNLVGYIV GSLLLSPLSD RIGRRNMLMI TMAITGLGSL
YNALVNDYSN FLLARTITGI GVGADLAVVN TYIGEVAPLN GRAKYTSFVF LFSTLGAGLG
LWLGLLLTTP PAPFPLGLPF ALGGSGFLAV NGWRVMYGIG ALLALIGLLL RFNLPESPRW
LISRGRIADA EAVVKQMEER ASRKLRSLPP LPAVIPPYVV ERLSYLDSLK AVILDRRYAR
RLAVLIPMWF FGYMTVYVLA AGLTTILASL GYPPPEAGII ASFGDIGFIL CAVTIMLVGD
KMERSRWTAI SVLFTIVGGV VIALAKTNLP LSFLGSSILF YGFNLWVPVS YAWSAESFPT
RARATGFALT DGLGHIGGGV GTVVVASFVA SLVSSGVTTG LAIEVFLLIA SFQIISTVIA
VSLGHKTANK RLDEISP
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