| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0960 |
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| Symbol | |
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| ID | 5104512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 886715 |
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| End bp | 887398 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506862 |
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| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
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| Protein accession | YP_001191055 |
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| Protein GI | 146303739 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000105238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.505565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGGTAT ATCTCATTGG AGCAGGCCCA GGAAACCCTG ACCTCCTAAC CTTAAGGGGA
TACAGAATTG CCCAATCAGC AGATATAGTG CTCTGCGATA GGCTCATCCC GGACGAGATG
TGCAGGAGCT TTAGGGGCAT ATCGATTACC ACGATAGATG ATGTGGTTCA GTTCGTAACT
GAGGCGAGTA AGAAGGGGAA GACCATTGCT TGGTTAAAGA ACGGGGATCC CCTCGTGTTC
GGTGGAAGTA TCGAAATATG TTCTGAACTA TTCAAGTTGG GAGTTAGTTG TGAGGTAGTT
CCTGGCGTAT CTAGCTCGAC TGGAGTAGCC TCTGGTGCAG GGATTCCGCT CACTTCCCCA
GATACTCCAC TGTTTACCGT GATAACCGCT ATATCCAAGG ACGGAAACCT AGTTGACTTC
AACGCTATTC CTAGAAAGGG GACATTAGTT ATTGTTATGG GTGGAAAAGT AATCAGTAAA
CTAAAAGGAG AACTTCTGAA GGCGAGATCT GAAGATGAGC CTGTTGCTGT GATCTCCAAG
GGCTCCATGG AGGAAGAGAA AATGAAGATA GGTAAGTTGA GGGATCTGGA CTTAATTGCT
ATGGGATTAG ATCCTCCTAT CACAATTGTT GTTGGAGAAA CGATCAGGTA TGCAAACATA
TATTCTGTGC ACATCGAACC TTAA
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| Protein sequence | MKVYLIGAGP GNPDLLTLRG YRIAQSADIV LCDRLIPDEM CRSFRGISIT TIDDVVQFVT
EASKKGKTIA WLKNGDPLVF GGSIEICSEL FKLGVSCEVV PGVSSSTGVA SGAGIPLTSP
DTPLFTVITA ISKDGNLVDF NAIPRKGTLV IVMGGKVISK LKGELLKARS EDEPVAVISK
GSMEEEKMKI GKLRDLDLIA MGLDPPITIV VGETIRYANI YSVHIEP
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