Gene Msed_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0875 
Symbol 
ID5103521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp808765 
End bp809793 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content42% 
IMG OID640506778 
Productmetallophosphoesterase 
Protein accessionYP_001190971 
Protein GI146303655 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTGC CAGCAACCCT TTTTAATAGA ATAACTTTTA GACAATTCAT GCCCCTGTTT 
AAAAGAAGAG GAAACAACGA AAGTGTAGGC GGAAAGAACA AAACAAGGAT TCTATTCACC
TCCGACCTTC ATGGGTCCGA GACTGCTTTT AGGAAATTTC TGAATGCCGG AGTGATGCAG
AAAGTTGATT GCCTTATCAT AGGTGGAGAT ATTGCAGGAA AGTCATTGGT ACCTATCATA
AATAAGGGAA ATGGTTATTT TGTTGTTGAG GATAGGGAGA TCAGCGGTAG CTCTCTTAAC
AACGTTGTCG CGGAATTCCG AAAGAGCGGC GCGTATTATG CGATTCTCTC TAAGGCTGAG
CATGAGGAAT TAATCAATAA CAAAAAGAAA CTTGACGAGC TATTTCACGA AAAGATGAAG
GAAAACCTAA GGAGTTGGGT TGAGATTGCT CAGGAAAAGC TGAAGGAAAG ACGGATTCCA
GTCTTCATCA ACCTAGGTAA CGATGATCCT TCGTTTCTCT TTCAAGTTAT TGAGGAGAGC
GAATTAATGA GAAAAAGTGA AGGAAATATA ATAGACATAG GCGGTCACGA GATGATATCC
TTCGGATATG TTAATCCCAC ACCTTGGAGA ACACCTAGAG AAATGTCCGA GGACGAGCTG
ATGTATAATC TGAGGGGAAT GGCTGAGAAG TTAGAGAGGC CAGAAAAGGC AATTTTCAAT
TTTCACGCTC CTCCATATAA TACTTCCCTT GATAATGCAC CGTTACTCTC TGCCGACTTG
AAACCAGTAG TAAAGGGAGG CGATGTGGTC ATGACTCACG TAGGTTCTAA GGCTATTCGC
AAGATAATAG AGGAATATCA ACCAATGCTA GGCATACACG GACATATTCA CGAGTCCAGA
GCGTTTGATA AGATCGGAAG GACAGTGATA ATAAATCCAG GTAGTGAGTT TAACCAGGGC
ATACTTCACT CTACACTTAT CTTGCTAGAA GATGGGAGAG TTAAAGGTAA CCAGTTTATA
GTGGGCTGA
 
Protein sequence
MFLPATLFNR ITFRQFMPLF KRRGNNESVG GKNKTRILFT SDLHGSETAF RKFLNAGVMQ 
KVDCLIIGGD IAGKSLVPII NKGNGYFVVE DREISGSSLN NVVAEFRKSG AYYAILSKAE
HEELINNKKK LDELFHEKMK ENLRSWVEIA QEKLKERRIP VFINLGNDDP SFLFQVIEES
ELMRKSEGNI IDIGGHEMIS FGYVNPTPWR TPREMSEDEL MYNLRGMAEK LERPEKAIFN
FHAPPYNTSL DNAPLLSADL KPVVKGGDVV MTHVGSKAIR KIIEEYQPML GIHGHIHESR
AFDKIGRTVI INPGSEFNQG ILHSTLILLE DGRVKGNQFI VG