| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0873 |
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| Symbol | |
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| ID | 5104267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 805468 |
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| End bp | 807054 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506776 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190969 |
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| Protein GI | 146303653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.237291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTTTG AACCAATGGC AAGCGGTAAA GAAGATCAAA AAGGAATTAA GGGTTCCCTT
TTTGCAAGGG AGTCCTCAGG TTTAGTCAGG GAAATAAACT GGCTAACTGC CATGTTTATT
AGCATGGGCT TCATTGCATT CTACGTCCTT CCAATATCCT ACCTATCGGG TCTCTCAATC
TCTCCGAACG GGCTTGTGGT TATTGGCGCC CTACTCAGCT GGATAGTTCT TCTCCCCCAC
GGTTATTTAT GGACAAAAAT AAGCGAGAAA TTTCAGAGAA CTGCTGCAGA TTACGTTTTT
GCGAGTAGAG TGTTACATCC TGCTATCGGA GTGGGAACAG GGCTTGTCTT CGGCATCTCC
CAGATGATAT TTGACGCTGC CATAGTTTAC GATGGCGTGG GCCAGCTACA GACAGGTTTT
TCGGCACTGG GGACAGATTT TGGAGGCTCC TACACGTCAT TGGCAACTAC CTTAGGGAAC
CCCTTCACAA TTCTCGCGAT AGGAGCAATT ACCTTCACAG GAGTAATTGC AATAAACATC
TTTCTGCCAA AGTATACCAA TCAAATAATG GGTGGAATAA CTATTGTAGC CTTAGTAACC
TTTGTATTAA CAGGGATACT GATGCATTAC GTTACGCCCG CATCGATAAC TGCGTCTGGA
TACGATTACA GCTCCATAGT GAAGGCGAGT TCTTCTGCGA CACCACTCTT CAGCAATCCG
ATCTTAGCTA CAATTGGTCT TATGGTGTTC ACTGCGAGTT TCCTTCCATT TGTTAATGGA
GCCACTTCAG TCGCTGGGGA GGTCCGAGGG GGAAGTAAGG CGTTCAGGAT CGGAGTACTA
GCAGCTCTTG TTGTTGCGGG TCTGCTAATA ACCTTCTTCA TCTCTTCGTC AGTTAGTACG
CTTACTTCAG AGTTTTTCAT AGGAGCTGGA GTCTTGGGAC CGAACTATTC TAATCTCCTA
AACCCAATAT TTGATGTAGT AGTGAGTTTC AGGAACTTGC CTTTAGATCT CTTTCTTGTG
ATAGGGTCTT ACTTCTGGTA CCTTGCCATA ATGTTCGCTG TCGCCCTCTT CGTATCTAGG
TATTTTATGG CTGTGGCCTT TGACAAGGCC CTACCAACAA TTGTCTCATA TGTTAGTGAG
AGATATCATT CCCCTGTGGT GGCACATCTG ATCGACGAAG CAATAACAAT TGGTAGTCTC
ACCGTTATCA CTGTCACACC TCTCAGCTCT GCCTTCTTTT ATGGCATGGA TACTGCTGAT
GCCATGGCTC TGCTCTTCGG CTTCATAGTG GTCATTCTGG CGTCCATAGT CGCATCAATC
AGAAGAAATG GATTAGAACT AAAGGGAAAC AGGGCCGTAA TACTAGGAAT ATCCATTGCT
GACCTAATAG TCATGAGTGT ATACGGTTTC TATTGGTTTG GAAATTCCAC AATTTACCTA
GGAATAAACA TGAATCCGGT CACCTGGCTC ATAGTCTCTT CTCCTTTCAT TGCTGGAATA
ATCATTTACT TCGTAATGAG ATGGTACAGG CTAAGAAAAG AGGATATCGA TATCAAATAC
TCATTCCAGG AAATTCCGCC AGAGTAG
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| Protein sequence | MNFEPMASGK EDQKGIKGSL FARESSGLVR EINWLTAMFI SMGFIAFYVL PISYLSGLSI
SPNGLVVIGA LLSWIVLLPH GYLWTKISEK FQRTAADYVF ASRVLHPAIG VGTGLVFGIS
QMIFDAAIVY DGVGQLQTGF SALGTDFGGS YTSLATTLGN PFTILAIGAI TFTGVIAINI
FLPKYTNQIM GGITIVALVT FVLTGILMHY VTPASITASG YDYSSIVKAS SSATPLFSNP
ILATIGLMVF TASFLPFVNG ATSVAGEVRG GSKAFRIGVL AALVVAGLLI TFFISSSVST
LTSEFFIGAG VLGPNYSNLL NPIFDVVVSF RNLPLDLFLV IGSYFWYLAI MFAVALFVSR
YFMAVAFDKA LPTIVSYVSE RYHSPVVAHL IDEAITIGSL TVITVTPLSS AFFYGMDTAD
AMALLFGFIV VILASIVASI RRNGLELKGN RAVILGISIA DLIVMSVYGF YWFGNSTIYL
GINMNPVTWL IVSSPFIAGI IIYFVMRWYR LRKEDIDIKY SFQEIPPE
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