| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0830 |
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| Symbol | |
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| ID | 5105191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 759193 |
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| End bp | 760440 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506735 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001190929 |
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| Protein GI | 146303613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGTA CATTAACTGA AAAAATACTT TCAAGGGCGT CAGGAAAAAC TGTTTCGCCC
GGTGACGTCA TAGAGGCAAA GACTGACATA GTGGCCTTCC ACGACCTAAC GGGATATCAC
GTAATTGAGG TAATGGAGAA GGCTAACATG ATGAAGATCT TCGATAAGAC AAAAATAGTT
GTAGCCTTCG ACCACTTGGC ACCGCCACCT GACGTCAGAA GCGCAGAGAT CCAAGGTAAC
ATAAGGAAGT TCGTGAAGGA GATGAGACTA CCTAACTTTC ATGATATTAA CGTGGGCATT
CTTCACGAGC TTCTCATAGA ACAATACGCC CTACCTGGTC AGGTGATTGT GGCTGCCGAC
AGTCACACGA CAACCTCTGG TGCCGTGGGA GCGTTTGCCC AGGGAATGGG AGCAAGCGAC
GTTGCTGCCG CCGTGATCAC GGGTAAAACT TGGCTAGTGG TTCCTCAGCC CTTCAAGGTA
ACCCTCAAGG GAAACCCCGG TAAGTGGATA AATGGAAAGG ATGTAGCCCT AGAGTTGCTG
GGTAAGTTCA AGGCTGATTA CTTTAACGGA ATGTCCATAG AGGTTCACGT CGAGAACCCC
AAGGCTTTCC CCATGGACTA TAGGGCGACG GTCTCCAACA TGGGGATAGA GATGAACGCT
GATGCCCTCA TGTTTGTCCC TGACGTCGAG ACCAAGGATT ACATAAAGAC CATGAGGGGG
AAGGAAGTTG AGCTCGTGAC CCCAGATCCT GGGGCAAAGT ATCTAGATGA GCACACAATT
GAGCTAGACA AACTGGAACC GCTTGTGGCT GCGCCCTACA GCGTAGACAA CGTTAAGACC
GCAAGGGAGG AGTCCAAGGT CCCAGTGGAT CAGGTCTACA TCGGTTCCTG TACCAACGGT
AGGCTATCAG ACTTCAGGAT TGCGTCGGAG ATCCTCAAGG GGAAGAAGGT CAAGACCAGG
TGTATAGCCA TTCCCTCTTC CTACACGATG TTTAAGCAGG CCATGGAAAT GGGTTACATC
GAAGACCTAG TTAATGCTGG ATGTGTGGTG ACCTACGGTA CCTGCGGGCC ATGTCTAGGC
GGTCACTTCG GAGTCGCTGG TCCAGGGGAG GTTATAGTTT CCACGAGCTC CAGGAACTTC
AGGGGTAGGA TGGGGAGCAA CGAGGCTAAG GTCTACCTGT CCGGGCCTTC GGTTGCGGCT
GCCTCAGCAG CTACAGGGTA CATAACTGAT CCGAGGGATG TGCAATGA
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| Protein sequence | MTGTLTEKIL SRASGKTVSP GDVIEAKTDI VAFHDLTGYH VIEVMEKANM MKIFDKTKIV
VAFDHLAPPP DVRSAEIQGN IRKFVKEMRL PNFHDINVGI LHELLIEQYA LPGQVIVAAD
SHTTTSGAVG AFAQGMGASD VAAAVITGKT WLVVPQPFKV TLKGNPGKWI NGKDVALELL
GKFKADYFNG MSIEVHVENP KAFPMDYRAT VSNMGIEMNA DALMFVPDVE TKDYIKTMRG
KEVELVTPDP GAKYLDEHTI ELDKLEPLVA APYSVDNVKT AREESKVPVD QVYIGSCTNG
RLSDFRIASE ILKGKKVKTR CIAIPSSYTM FKQAMEMGYI EDLVNAGCVV TYGTCGPCLG
GHFGVAGPGE VIVSTSSRNF RGRMGSNEAK VYLSGPSVAA ASAATGYITD PRDVQ
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