Gene Msed_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0821 
Symbol 
ID5105144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp752474 
End bp752947 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID640506726 
Producthypothetical protein 
Protein accessionYP_001190920 
Protein GI146303604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.904359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG AGTTAACTCC TCTCGAGAGA CTCCAGCTAA TAGTTCCCGG GTACAGGGGG 
TACAAGGCAA AGGATCTGAT CAGACAGGAC GACTTCCTAA TAAGGTCATC AGTTAAGACT
AAGCTAGAGA ACGCATTGAA TAAGATTGCG GAACTGGAGG CTCAAATAGT TTCCACCTCT
CCCTTCTCTC CAGAGCTCAA GAAGCTTGAG TTCCTTGCAT CAAAGATCAG AACCCTAGTA
TCTGAAATGG TCGCATCTCA GGGAGGAGGA GCAGATGTGT ATGCAAGATA CAAGATAACC
ACTGAAGCCC TTGATGAGAT AGTAAAGAAT GATCTAAACA TGATAAATAT AGCAAATCAA
ATCTACAATG ACATAAGTGC CGGGAGAGTT GACTCCATAG ATTCAATGCT GAATCAATTG
CGCGAAGTGT TGGTGAGAAG GCAGGAGCTA TTCTTCCCGC AGGAATACAG ATGA
 
Protein sequence
MTKELTPLER LQLIVPGYRG YKAKDLIRQD DFLIRSSVKT KLENALNKIA ELEAQIVSTS 
PFSPELKKLE FLASKIRTLV SEMVASQGGG ADVYARYKIT TEALDEIVKN DLNMINIANQ
IYNDISAGRV DSIDSMLNQL REVLVRRQEL FFPQEYR