Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0767 |
Symbol | |
ID | 5103456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 701339 |
End bp | 701743 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640506672 |
Product | ferric uptake regulator family protein |
Protein accession | YP_001190866 |
Protein GI | 146303550 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.531572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0222977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCG ATATAGCTGA AATGCTGAGG AAAAGGGGTT TAAAGGTAAC CCCCCAAAGG ATAGCTGTCA TAAAGACAAT GATAAGGGGT GGGCATTTTA GTGGGGAACA GATTTTCAGC GAACTGAAAA AGACTGAACC CAGTATTAGC CTTTCCACCG TCTATAATGC CCTTGAGACT TTGGAGAAAG CTGGAATCAT AAGATCCTTT GAGGCTGGAG GGAAAACATG GTACGAAATG CGAATGGAAC CTCACGTTAA CGTGTTCTGC GAGGATCTGG GCGACATAGT GGACGTGGAT TTAGATCTAG GATCACTCGA GAAGAACCTT GAAGAAAAGG GCATTCAACC GAAAAATTTG AGCGTGATAG TCTATGCTGA GTGCTCTAAA ATGAAGAAAG TATAG
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Protein sequence | MEIDIAEMLR KRGLKVTPQR IAVIKTMIRG GHFSGEQIFS ELKKTEPSIS LSTVYNALET LEKAGIIRSF EAGGKTWYEM RMEPHVNVFC EDLGDIVDVD LDLGSLEKNL EEKGIQPKNL SVIVYAECSK MKKV
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