Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0762 |
Symbol | |
ID | 5103451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 695187 |
End bp | 697763 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640506667 |
Product | SMC domain-containing protein |
Protein accession | YP_001190861 |
Protein GI | 146303545 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0108669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00239369 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACTTG ACAGGGTCTA CTTGAAAGAT TTCCTCAGCC ACGAAAAAAC CACCGTTTCC TTTAAGGGAG ACATTAACGT CATAGTGGGA CAGAACGGTG CCGGAAAAAG CTCAATCATT GAGGCAATTA CCTTTGCCCT CTTTAGGGAA GGGAAGGGTA AACAGGAGGA GATGATAAAG AAGGGAAAGA CTAATGCTGA GTTGGAGCTC GTTCTCAGGG ACAACAACCT TGAGGTAAGG GTTCTCAGGA AAATACCTCC TGGTGATCAG CTCTATGTCA ACGGTAAGCT TACGGCCAGG GGCACCAAGG AGGTGACAAA GAAGATCGAG GAACTGGGTC TCAACAGCAA GGTGGTCACC TCGACCATGA TAGTTAGACA GGGCGAGATA GAGACGATCT TTGACACGTT GACGGATGTG CTCAAGAGGG TAATGATGAT AGACAACCTG GAGAAACTCA CCGAATCTGG AGGAAAGATC AAGCAACTCA TGGACAAATA TGACCAGGAG GTCAGATCCC ACGAGATTTA CCTTGAGAAT CTCAGGAGGC TTCAGGAGGA AAAGTCAAGC CTCGAAAGGG AAATCTCCTC CCTGACCGAG AGGATGGAAA AGACGAGGGA GGAACTGCAG AAACTGGAGA GCGAGGAAGC CAAACTAAAG GACAAGATAA AGGATCTAGA GGAGAAACAG AGGGAATATG ACGTCCTACT CTCAGAGAAG AGGCTGGCAG AGGACGAATT GCAAAGGGTA ATGGCGGAGC TCAGGAATTT AGAGGGACTT GAGCGTAGGA TCTCCAATCT CGAGGAGAAG GAGAAGGAGT TAGAGAAAAT AGTTTCTCTG AGTGATACCA TCCTTGACCT TGAGGGCAAG AGGGCCAGGT TAACGGATAG GAAGAATGAG TTTGAAAGGG TAAAGAGACA GTTCGAGAAA AAGAGCAAGG AGTTTGAGCA GAAGAGAAAG CTAGAGCCTA GACACGAAGA GTATCAGAGG GTTGTATCAA GGCTTAAGGA ACTAGAGGAA TACCATGAGA GATTCACCAG TCTGTACTCA ACTCTCAGGA ACTTAATGGA ACGTAAAAAT AAAATCGAAC AGGAGGTGAG GATGCTTCCA AGGATTGCGG TGGAGGAGAT TCAGACGAGG CTTGACTCGG TCTCTAAGGA GCTAGACGAA GCGGCCTCAC TTCAAAAGGA AAGAAAGGTG GAGTATGATC AGATAAGGAA AAGCCTAGAC GCTCTCCTTT CAGCTACAGA GGGGAAGTGT CCAGTATGCG GTGGCCCATT GGACGAACCC CATAGACAGG AGCTTACTCA GAAATACAGG CAACGTCTGA CGGAGTTGAG CAAGGAGCTC AAGGACCTGG AGGGTAAGTT GGAAAGTCTC AAAAGGGACA AGTCACGTCT GGAGGATGAA CATAAGAGGG CCATAAGGGT GGACGCGGAG AGAAGGGGTA AGGAGAATGA TCTGGAGGGC CTATCTAGCG ATATAGCACG GCTGGAATCA GAGCTCAAGC AATTGAAGGA ACTCGAGGAG GAATTCAGGG CCATGCAAAG GAGGAAGGAC GAACTTGAGA ACGACGAAAG GAGTTACCTC CAGGTACAGG GGGTCAGCGA GGCTGAAGTG ATGGAGCTAG AGGATCAGAT GGCTACCTAT TCCCACGACA TTTCCACACT GGAGGAGGAG ATTGATCAGC TAGAGGGGAG AGTGGGAAAC CTCACGAAGC AGGACGTGGA AAGCGCTAAG GGTCAGCTGG AAAAAGTGCG CAGGGAACTA TCTGAGCTAC AGAGGAAAAG GGGGGAGAAG ACGAACCTTG AATCCAGAAT GGTGGAACTG AAGAGGAGCG TTGACGAGCT TTCCAGGAGG ATTCAGCTCC TTGGGTTCAG GAGACAAGAT CTAGAACAGA TGAGGCGAGA CCTCGAGGTG TTAAGTAAAC AGCTCAGGGA AGTTCACGGA GATCTTGGAA ACCTCGAGGG TAAACTTAAC CAGGTTAAGG GGAGGCATCA GGAGGTTGAG AACGAGATTG CTCAACTCCA GGAGAAGGTC AAGGAGGTGG AGAAGAGTAG GAGGGCTAAG GAGCGCCTTG AGAAGTTAAG AAAGGTACTT TCCGAGGGAA TGCTTCAGTC ATACCTAATT TCTACGCTCA AGGGAAGGAT AGAGAATAAT CTCAACGACA TAGTTTCCAT GTTTGATATC TCATATACGA GGATACTCGT AAACATGACC CAGACCAAGA CCCTCAGTGG AAAGGTTGAG CTCACGGCCC TGAATCAGTC CGGCCAGCAA CTCTCCATAG GGATGTTGAG CGGAGGCGAG AAGATCGCAG TTGCCCTAGC CCTTAGACTA GCCATAGCTA GAGCCCTTAC GGGGGAGATA GGTTTCATGA TATTGGACGA GCCCACGGTT CATCTAGATT CCATGAGAAG GGCCGAACTG CTCTCGGTGA TAAGGGAGTC CATGAACGTT GTACCCCAGA TTATAGTTGT AACCCACGAC GATGAGGTGT TAAGGATAGC GGATTACGTA ATAAGGGTGG AGAAAGTGGG GGAGAGTAGC AGGGTGAAGG AGGAGATCGC ACAGTGA
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Protein sequence | MRLDRVYLKD FLSHEKTTVS FKGDINVIVG QNGAGKSSII EAITFALFRE GKGKQEEMIK KGKTNAELEL VLRDNNLEVR VLRKIPPGDQ LYVNGKLTAR GTKEVTKKIE ELGLNSKVVT STMIVRQGEI ETIFDTLTDV LKRVMMIDNL EKLTESGGKI KQLMDKYDQE VRSHEIYLEN LRRLQEEKSS LEREISSLTE RMEKTREELQ KLESEEAKLK DKIKDLEEKQ REYDVLLSEK RLAEDELQRV MAELRNLEGL ERRISNLEEK EKELEKIVSL SDTILDLEGK RARLTDRKNE FERVKRQFEK KSKEFEQKRK LEPRHEEYQR VVSRLKELEE YHERFTSLYS TLRNLMERKN KIEQEVRMLP RIAVEEIQTR LDSVSKELDE AASLQKERKV EYDQIRKSLD ALLSATEGKC PVCGGPLDEP HRQELTQKYR QRLTELSKEL KDLEGKLESL KRDKSRLEDE HKRAIRVDAE RRGKENDLEG LSSDIARLES ELKQLKELEE EFRAMQRRKD ELENDERSYL QVQGVSEAEV MELEDQMATY SHDISTLEEE IDQLEGRVGN LTKQDVESAK GQLEKVRREL SELQRKRGEK TNLESRMVEL KRSVDELSRR IQLLGFRRQD LEQMRRDLEV LSKQLREVHG DLGNLEGKLN QVKGRHQEVE NEIAQLQEKV KEVEKSRRAK ERLEKLRKVL SEGMLQSYLI STLKGRIENN LNDIVSMFDI SYTRILVNMT QTKTLSGKVE LTALNQSGQQ LSIGMLSGGE KIAVALALRL AIARALTGEI GFMILDEPTV HLDSMRRAEL LSVIRESMNV VPQIIVVTHD DEVLRIADYV IRVEKVGESS RVKEEIAQ
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