| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0716 |
|---|
| Symbol | |
|---|
| ID | 5103754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 654071 |
|---|
| End bp | 654865 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506620 |
|---|
| Product | NAD synthetase |
|---|
| Protein accession | YP_001190815 |
|---|
| Protein GI | 146303499 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0171] NAD synthase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.866923 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAA ATCCAACTCT CAAGAATTAC CTGGATTTAG ATTACGGTAA AGTAACGGAT
TATCTAGTTA ACAAACTTAG GGACTACATT CGCGATTCCG GAAAGAAAGG AGGAGTAGTA
GGAGTTAGCG GTGGAATTGA CTCCGCCGTC ACTGCCACAT TGCTTTCAAG GGCAACTCAA
AACTTCTACT TTCTAATTAT GCCCTCAAAT AGCACCCCAC AACAGGATCT CGAGGACGCA
TTACACCTAA CCGAGATGCT AAACGGAAAA GACAAGAGAA CCATTATCTC AATTGATAAC
ATTGTAGAAA ACTTTTCCAA TGTCGTGAAT ACCCGAGACA AACTCATCGT GGGAAACATA
AAGGCCAGGA CTAGAATGAT CCTTCTTTAC GCGTTTGCGC AGAAGATGGA CTACCTAGTA
ATAGGAACAG GGGACAAATC TGAGCTCCTC CTGGGGTATT TCACAAAGTA TGGTGATGGG
GGAGTGGATG TCTTGCCCAT AGGGGATCTA TTTAAGACTC AAGTGAGGAA ACTGGGGGAA
TACCTCAAGC TACCCTCTAG GATCGTCAGT AAACCTAGCT CGCCTGCCTT GTGGGAAGGT
CAGACTGCAG AGGGAGAACT TGGCGTGTCC TATGAGGTTG TCGATCCCAT ACTTTACCTG
CTAGAGAAGG GGAAGGGCGA CCTGGAGATA ACCTCAGAGC TAGGAGTAAA CCTCAACCTC
GTTAGAAGGA TCCGAACAAT GGTTGAGAGA TCCAGACACA AGAGATTACC CCCTGAGATC
TTCAAGTTGC CTTGA
|
|---|
| Protein sequence | MISNPTLKNY LDLDYGKVTD YLVNKLRDYI RDSGKKGGVV GVSGGIDSAV TATLLSRATQ
NFYFLIMPSN STPQQDLEDA LHLTEMLNGK DKRTIISIDN IVENFSNVVN TRDKLIVGNI
KARTRMILLY AFAQKMDYLV IGTGDKSELL LGYFTKYGDG GVDVLPIGDL FKTQVRKLGE
YLKLPSRIVS KPSSPALWEG QTAEGELGVS YEVVDPILYL LEKGKGDLEI TSELGVNLNL
VRRIRTMVER SRHKRLPPEI FKLP
|
|---|
| |