| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0699 |
|---|
| Symbol | |
|---|
| ID | 5105305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 636850 |
|---|
| End bp | 637656 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640506603 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190798 |
|---|
| Protein GI | 146303482 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2105] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000877055 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTACATCA TGGCCTACGG GAGCCTAAGG TATGGGTTTG AACTTCATCA TTACCTGAGG
AAAGCTAGGT TTGTTGGCCT TGGCTACGCG GAGAATTACG ACATGTATGA TCTGGGCGGT
TACCCAGGCG TGGTGAAGGG TGAAGGCAGA ATATGGGGTG AAGTTTATGA GATCGATAGG
GCCACACTTA ACGTTCTGGA TCAAGTTGAG GACTATAAGG GAGAGGAGGA CGACCTATAC
ATTAGGGAAA AGACGACAGT TTACTTTGAC GAGAAGAGGC TCCACAGACT AGATGGGGTA
TACATATACA GGTACAATCA AAGCATCAAG GATAGGGAGC TCATCCCATC GGGGGATTAC
TCCCGCTGGA TAGGGATGCC GGTCATAACG AATCTATTTG CCTACGCCGA GAACACAAAC
TATGACGTAC TAAGTGAGAG GGGAGTTAAG GAGATACTTA GGGAGGTTAA TGGGATACTC
AAGGGTTATA GGATGGTATT CAATGTACCG TGTAAGTACG GCCTGTGCGC TAATCTTAGG
GAGGATCCAA ATGGGAAAGT GTGCGGTTAT GTTTACACGC TTCTAGAGGA TTACCTTAAC
ACGCTGGATA AGGCAGAGGG CCATCTCATA AGATACGTGA GGAGAACCTT GAAGGTGGTG
GATGAACAGG AAAGGGAATA CTTTGCTGTG GCATATGTGG CTGATCTAGA CAAGGGGGAG
GGGAATCCCA CAGAAGAGTA TAAAAATATC ATTTTGAAAG GCCTAAGCAG AAGATGGAAG
TCCGGCTGTG TTAGCACGGG CCTATGA
|
|---|
| Protein sequence | MYIMAYGSLR YGFELHHYLR KARFVGLGYA ENYDMYDLGG YPGVVKGEGR IWGEVYEIDR
ATLNVLDQVE DYKGEEDDLY IREKTTVYFD EKRLHRLDGV YIYRYNQSIK DRELIPSGDY
SRWIGMPVIT NLFAYAENTN YDVLSERGVK EILREVNGIL KGYRMVFNVP CKYGLCANLR
EDPNGKVCGY VYTLLEDYLN TLDKAEGHLI RYVRRTLKVV DEQEREYFAV AYVADLDKGE
GNPTEEYKNI ILKGLSRRWK SGCVSTGL
|
|---|
| |