| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0693 |
|---|
| Symbol | |
|---|
| ID | 5105299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 632776 |
|---|
| End bp | 633294 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640506597 |
|---|
| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
|---|
| Protein accession | YP_001190792 |
|---|
| Protein GI | 146303476 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.152169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000247866 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTT ACGGAGTTGG AGTAGGCCCT GGCGACCCGG AACTGCTCAC CCTCAAGGCC
CTCAGGCTGA TCAGGGAGGC AGACCTGGTA GTGATTCCCA CTTCCTCAAA GAGGTTAACC
CTTAACGCTG TTTTACCACA TGTGCAGGGA AAGGACGTAT TACAGTTTCC ACTACCCGTC
AGAAGGGACA GGTCTGCCTA CCAGAGCTTG CTGGACCAGA TCAAGTCCTA CAATAACGTG
GTATACGTAA CCTTGGGGGA TCCGGCCTTC TACAGCTCCC TGTATAGGCT TGGTCAGTTC
ACCGAGATTA GGGATGTGGT ACCTGGAATA ACTTCGTTTT CGTGGTGTTC CGCCCTTCAC
AAAGTCCCTA TTGCACTGGG GAAGGAGAAG GTCTTAATAT CACCTGAGCC AGTAAGCGAG
TTCAAGGCCG ACACACTGGT ACTCATGAAG GGCGAGGCAG ACTCACCCAT AAGGTGCGGA
AACGGCTACT TCACAGTCTC CATAAAAAGG TTAAGTTAG
|
|---|
| Protein sequence | MNLYGVGVGP GDPELLTLKA LRLIREADLV VIPTSSKRLT LNAVLPHVQG KDVLQFPLPV
RRDRSAYQSL LDQIKSYNNV VYVTLGDPAF YSSLYRLGQF TEIRDVVPGI TSFSWCSALH
KVPIALGKEK VLISPEPVSE FKADTLVLMK GEADSPIRCG NGYFTVSIKR LS
|
|---|
| |