Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0681 |
Symbol | |
ID | 5105287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 623747 |
End bp | 625108 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506585 |
Product | geranylgeranyl reductase |
Protein accession | YP_001190780 |
Protein GI | 146303464 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00166018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000684168 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAACAAC TAACCTACGA TGTATTAATA ATTGGTGGAG GATTCGCAGG TTCCACCGCG GCATGGCACC TGGCGAATAA GGGACTTAAG ATACTTCTAA TAGACAGTAA GCCGTGGAAT AGAATTGGGG ACAAGCCTTG CGGAGACGCA GTTAGCAAGG AACACTTTGA CAACCTTGGT ATGCCCTACC CAGAGGGAGA ACAACTTGAA CAGAAGATCG ATGGAATCAA GTTATATAGC CCCGATATGT CCACAGAGTG GACCGTTAAG GGCGAAGGAT TTGAGATAAA TGCCCCAGCC TATACGCAGA GGATATTGAG GGAAGCCAGG GACAGGGGAG TTGAAGTGAT GGACTTAACC ACTGCCATGA AGCCTATTCT AGAGGACGGC TTCGTAAAAG GTGCGGTGAT ATTTGACAGG AGGAAGGAGG AACAGATAGA GGTAAGGGCC AAGATGGTCA TAGAGGCTAC TGGATACTCA AGAAGCTTCA GGAGCAAACT CCCTCAGGAA ATCCCCGTCT CTGAGGACAT GGATGAGAGG GACGCGGACA TCGCCTATAG GGAAGTGGCC TATACTAGGG AGGACATAGA TGAACCTGGA TACTTGAAAA TCTTCATCAA CCAGACCACC TCACCTGGAG GATATTGGTG GTATTTCCCA AAGGGGAAGG ATAAGGTAAA CATAGGACTG GGAATACAGG GAGGAATGGG CTACCCCAGC ATCTACACCT TCTATGAGAA ATATTGGAAA GAATATGGTG CTGACGTAGA CAGGAACAGA ATGATAGTAA AGGGAGGAGC CCTTGTGCCC ACCAGGAGGC CCCTGGACAC CCTGGTTTGG AACGGTATAA TAGTCATAGG CGATTCTGGA TACACGGCCA ACCCAGTCCA CGGAGGCGGG AAAGGATCGG CAATGATATC AGGCTTCTGC GCAGCTAGGG CGACGCTTAA CTCCTTTGAG AAGGGAGACT TCTCGGCGCA ATCCCTCTGG GAAACTAACC TATGTTATAA CGAGCGTTAT GGTGCAAAAC AGGCTAGCTT AGAGCTCTTC CGAAGGTTCC TTCAGAAGCT GTCAGATGAC GACATAAATT ATGGAATGAG GAAGAAAGTC ATTAGGGAGG AGGATCTTCT AGAGGCAAGT ATGACCGGAG ACCTTCAGCT ATCCGTAGCG GATAAGGCAA TGAGGGTAAT TGCAGGTTTA GGAAGACCTT CTCTGCTATA CAAACTCAAG AATGTGGCGG AGTATATGAA GGAGATAAAG GCTCTCTACA GAGCTTACCC AGCAGGTCCA GATCAGCTAC CAAAGTGGAA AGGGCAAGTA AAGCAACTCA TCTTAGAATT TGACAAGGTA ATTTCCAAGT AG
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Protein sequence | MKQLTYDVLI IGGGFAGSTA AWHLANKGLK ILLIDSKPWN RIGDKPCGDA VSKEHFDNLG MPYPEGEQLE QKIDGIKLYS PDMSTEWTVK GEGFEINAPA YTQRILREAR DRGVEVMDLT TAMKPILEDG FVKGAVIFDR RKEEQIEVRA KMVIEATGYS RSFRSKLPQE IPVSEDMDER DADIAYREVA YTREDIDEPG YLKIFINQTT SPGGYWWYFP KGKDKVNIGL GIQGGMGYPS IYTFYEKYWK EYGADVDRNR MIVKGGALVP TRRPLDTLVW NGIIVIGDSG YTANPVHGGG KGSAMISGFC AARATLNSFE KGDFSAQSLW ETNLCYNERY GAKQASLELF RRFLQKLSDD DINYGMRKKV IREEDLLEAS MTGDLQLSVA DKAMRVIAGL GRPSLLYKLK NVAEYMKEIK ALYRAYPAGP DQLPKWKGQV KQLILEFDKV ISK
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