Gene Msed_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0644 
Symbol 
ID5103804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp590002 
End bp590427 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID640506548 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001190743 
Protein GI146303427 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0290775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.389247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATC AAGGTGAGGT AAAACTTAAC GTAGACAAGT CAACTATTTG GGGAATCCTG 
AGCAATCCTG AGTCCGTCTC GTCATGTTTT CCTGGAATAA AGAGTATTAC TAAGGAAGGC
GACGCATACA AGGTAGTTGG ATCTGCTGGA ATTGGTTTCA TTAAGGGAGA ATACAAGGCA
ACCGTGACCT TTACCAACGT AAAGCCCATG GACAGTATGA CGATAAGTGC CAAGGGAACA
GGATTGAACA GTAACGTGGA TATAGTGGCT CAGGTTAAGG TGGACGATGG GAAACTTACC
TATGACGCCG AGGTTAAAGT TGCTGGAGTA CTTGCCTCTG TGGGGGCAAG GCTTATGGAT
CCTGCGGTGA ACAAGCTTAT TTCTGATCTC TTTGACTGTA TAAAGAACAA GGTAGAGAAG
AAATGA
 
Protein sequence
MKYQGEVKLN VDKSTIWGIL SNPESVSSCF PGIKSITKEG DAYKVVGSAG IGFIKGEYKA 
TVTFTNVKPM DSMTISAKGT GLNSNVDIVA QVKVDDGKLT YDAEVKVAGV LASVGARLMD
PAVNKLISDL FDCIKNKVEK K